| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_R0115 |
|---|
| Symbol | |
|---|
| ID | 5080547 |
|---|
| Type | rRNA |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 4078858 |
|---|
| End bp | 4080412 |
|---|
| Gene Length | 1555 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | 640500710 |
|---|
| Product | 16S ribosomal RNA |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000362636 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTAATTGAAG AGTTTGATCA TGGCTCAGAT TGAACGCTGG CGGCAGGCCT AACACATGCA
AGTCGAGCGG CAGCACAAGG GAGTTTACTC CTGAGGTGGC GAGCGGCGGA CGGGTGAGTA
ATGCCTAGGG ATCTGCCCAG TCGAGGGGGA TAACAGTTGG AAACGACTGC TAATACCGCA
TACGCCCTAC GGGGGAAAGG AGGGGACCTT CGGGCCTTCC GCGATTGGAT GAACCTAGGT
GGGATTAGCT AGTTGGTGAG GTAATGGCTC ACCAAGGCGA CGATCCCTAG CTGTTCTGAG
AGGATGATCA GCCACACTGG GACTGAGACA CGGCCCAGAC TCCTACGGGA GGCAGCAGTG
GGGAATATTG CACAATGGGG GAAACCCTGA TGCAGCCATG CCGCGTGTGT GAAGAAGGCC
TTCGGGTTGT AAAGCACTTT CAGTAGGGAG GAAAGGGTAA GGTTTAATAC GCCTTATCTG
TGACGTTACC TACAGAAGAA GGACCGGCTA ACTCCGTGCC AGCAGCCGCG GTAATACGGA
GGGTCCGAGC GTTAATCGGA ATTACTGGGC GTAAAGCGTG CGCAGGCGGT TTGTTAAGCG
AGATGTGAAA GCCCTGGGCT CAACCTAGGA ATAGCATTTC GAACTGGCGA ACTAGAGTCT
TGTAGAGGGG GGTAGAATTC CAGGTGTAGC GGTGAAATGC GTAGAGATCT GGAGGAATAC
CGGTGGCGAA GGCGGCCCCC TGGACAAAGA CTGACGCTCA TGCACGAAAG CGTGGGGAGC
AAACAGGATT AGATACCCTG GTAGTCCACG CCGTAAACGA TGTCTACTCG GAGTTTGGTG
TCTTGAACAC TGGGCTCTCA AGCTAACGCA TTAAGTAGAC CGCCTGGGGA GTACGGCCGC
AAGGTTAAAA CTCAAATGAA TTGACGGGGG CCCGCACAAG CGGTGGAGCA TGTGGTTTAA
TTCGATGCAA CGCGAAGAAC CTTACCTACT CTTGACATCC ACAGAACTTT CCAGAGATGG
ATTGGTGCCT TCGGGAACTG TGAGACAGGT GCTGCATGGC TGTCGTCAGC TCGTGTTGTG
AAATGTTGGG TTAAGTCCCG CAACGAGCGC AACCCCTATC CTTATTTGCC AGCACGTAAT
GGTGGGAACT CTAGGGAGAC TGCCGGTGAT AAACCGGAGG AAGGTGGGGA CGACGTCAAG
TCATCATGGC CCTTACGAGT AGGGCTACAC ACGTGCTACA ATGGCGAGTA CAGAGGGTTG
CAAAGCCGCG AGGTGGAGCT AATCTCACAA AGCTCGTCGT AGTCCGGATT GGAGTCTGCA
ACTCGACTCC ATGAAGTCGG AATCGCTAGT AATCGTGGAT CAGAATGCCA CGGTGAATAC
GTTCCCGGGC CTTGTACACA CCGCCCGTCA CACCATGGGA GTGGGCTGCA AAAGAAGTGG
GTAGCTTAAC CTTCGGGGGG GCGCTCACCA CTTTGTGGTT CATGACTGGG GTGAAGTCGT
AACAAGGTAG CCCTAGGGGA ACCTGGGGCT GGATCACCTC CTTACCTATA CGACT
|
|---|
| Protein sequence | |
|---|
| |