Gene Sputcn32_3998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3998 
Symbol 
ID5081507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp4652129 
End bp4653109 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content43% 
IMG OID640501210 
Productpeptidase M56, BlaR1 
Protein accessionYP_001185500 
Protein GI146295076 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGTTG GCGATTTAGC GATTACACTG AATTTACTGA GTGTGGCAGT GCTGGCATTT 
GCTATCAGTG TTGTGTTCAT CTCGATCGCT CTACGATTCA CTCTGCCTAG ATTAGAGCAT 
CTCACTTTCA GGTTACGTAA AGTTATCCTA TGGTCGTTAG TCACAGCGCC TTGGTGGATA 
GCGATTAATT GTGTTGTCTT TTTCTGGCCG AAGCAGCAAG ATTTGTTTTC TGCAGCTTGG 
TTAAATGAAT TTGTTCACTG GCACCATGTG GATATTTTTA GCTTTGACAG TTGGCACGCA 
GTTACCTTGC TTTCGGCCTC GGGATTTTTG ATTTGGTCGA TGATAAAGAC TGTTTATTCT 
CGCAAAAAAC AATCATCAAC AATGGCGTCT CTGCTTGGAT TATCAGATGT TTACCCCCAA 
GAAGCCAACT CTCAGCATCG TTATTATTTA TTACCTTTGG CAATACCTGC AGCTTTTACC 
ACAGGGCTTA TTTCTCCCAA AATCTATCTG ACTACGGCAC TACAAGAACG GGTTAATGAG 
CAGGAATTAG ATATTATTAT CCGGCATGAA ATGGCGCATG TCGCTGCCAG AGATCCTCTG 
TTTAAAGTGA TCTTCGCGAC TTTTGCAGGC TTTTTTCCGC TCGGGATGAA ACAACATTTG 
GTCAAGCAAT TTACCTTGCT TACTGAACTG ATGGCAGATC ATGCAGTGAC AAATGAACAC 
GACCATCTTG ACGTTGCTCA GGCTCTGGTT AACGTTGCCA GAATGCAACG AAGCGTAACG 
CTAGGTTGTG ATGGGTTGCA AACGAGCTAT TTCGGCAATG ATCAAACCAG CGTGCGAGTG 
CAGCGCCTAA TTTATCCTGT TTGTACATCT TCTCGATTGG CAATCGGTTT AGCTATTGTG 
TTGTTAGTCA TAGCACCAGT ATTAACCGCC TCCACGGTGG ATAGCCTCCA CCATATTATC 
GAAACTTTTT TCACCCATTA A
 
Protein sequence
MFVGDLAITL NLLSVAVLAF AISVVFISIA LRFTLPRLEH LTFRLRKVIL WSLVTAPWWI 
AINCVVFFWP KQQDLFSAAW LNEFVHWHHV DIFSFDSWHA VTLLSASGFL IWSMIKTVYS 
RKKQSSTMAS LLGLSDVYPQ EANSQHRYYL LPLAIPAAFT TGLISPKIYL TTALQERVNE 
QELDIIIRHE MAHVAARDPL FKVIFATFAG FFPLGMKQHL VKQFTLLTEL MADHAVTNEH 
DHLDVAQALV NVARMQRSVT LGCDGLQTSY FGNDQTSVRV QRLIYPVCTS SRLAIGLAIV 
LLVIAPVLTA STVDSLHHII ETFFTH