| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3917 |
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| Symbol | |
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| ID | 5081347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4544712 |
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| End bp | 4547162 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640501129 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001185422 |
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| Protein GI | 146294998 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAGAA AACTTTCACT CGCAGTTCTA ATTCCTCTTT GTATGCTAAT ACTTTATTTG
GTGTTAGTCA TAGGAGAGTA TTTGTATGAG AGTGATCAAA TACGCAGTGA GCTCGCTGGA
CGTCAGGTTA CTCAAATAAA ACAACAGCTT TTGAGAATGC AGGCGGTTGT ACAATCGGCA
CAAGTTTTAC AGGATATTGA GCGTATAGAG CAAGAGGTGT CATTGGCTGC ACTGGATATG
AACACAATGG TGTATATATT GGTGGATATG GATAGTCGGA TCCGCTTTGC TAATCATACC
GTTTGGCGCG ATAGTAATGC TATTCAAGTT ATTGATGGTT ATGATGTTGT TCGACATCAT
ACCGTTGCTC AATCCTCTCT CCCGCAAGTA TCTGTCAATA TGGAGCGTTT AACGATTCAG
GCTTATTATC CTGTTATTTC TCAATACCCT GGTGCAGTTG AATTAATTTA CCTCGAATCT
GACTTGGCTC CTTTAGTTTC AGAAGCCTCT GCTAAGTTAC AACAGCGATT TATCCGTGTA
TGGGGCTTGG GTGGATTGCT ATTGATTGGT TTTACTCTCA TTTTATATTT TTTATTAATT
AAGCCATTTC GGATTTTAAG TGAAAGTGCA AAGCATATAG GTACACCTGA ATTTTCAACT
CAGATCCCTT GGAGTTCTTC AGAGGTTTTG TCACTGCAAA GCAGTTTACA GGAGGTACAT
GCCCGTTTGG GACGTGCAGT AAAACAGCTA AATGACAGTG AGCAGCGTTG GCTATTTGCC
GTTGAGGGAT CTCGTAATGG TATTTGGGAT TGGGATATTA GCACTGGTGA AGTATTTCTT
TCCGATCGTT GGAAAGAGAT GATTGGATAT GCTCCTGATG AATTAGAGTG TGTTTTTAAA
ACTTGGGAGT CGCGGCTGCA TCCGGAAGAC CGAGAGACTG TTTTAGATTG TTTGCAGGAA
TATATTAGCG GTAAAAGTAA AGAGTTTGAG AGTGTCCATA GACTGCGGCA TCGTGATGGT
CATTATATAT GGGTGCTCGA TCGTGGCATG CTTGTTGATT GGGATCATTT GGGCCGTCCA
ATGCGGATGA TAGGCATCCA TGTTGATGTA TCTGAAAGTG AGAAAAACCA TGCAGCAATT
GCAGAGTTAG TTGAACATTC AGTTGCTGGG CATCGAATGT TACCAGCAGT ATTCATGGAA
CGTTTGTCCC AATTTCTGAC TCAAGAAGAT AATTCTGGTC ATTGGGGTGG ATTATTTTTT
ATTGAGGTTG AGAGTTTAGG GGTAATGAAC TCGCTAACTT CACATGAAGC TGAGCGTTTA
TTTACACAGA TTGGCGCGAG ACTCTCGAGC TACTTCACAG ACAATATTAT TGTTGGACAT
TTGGAGTTAG GGCGTTTCAC CTTGCTTGCT AAAGAATTGT CGATTGATGC AGAAGTGGCT
GCACGTCGAA CTCTAGCCCT AGCGACTGAG TTGAGGCAAA TCATTGCAAG ACCATTTCAT
TACAGAGATC ATCACTTTGA ATTAAATGCC AATGTCGGTA TTTATCTGCT CGATCCAGTA
GAAACATTAG AGCCCCTACT TGTGATACGC CGCGCCGAGC TAGCCCAAAA ACATGCAAAA
TTGTTAGGGC AATGCGGTTG CGCTTTTTAT CATTCGGAGT TAGATGTTCG TCAGAGTCGT
GATGAGCTGT TACAACATGA GCTTAAGTTA GCGATAGAAC ATGAAAAGCT ATCATTAATG
TTTCAACCGA TTGTGAATGT AGCGGGCGAA ATTCTCTCTG CAGAAGTGTT ATCACGTTGG
TATTTAGCTA ATGGTGATGT TGTTCCTCCT TCTGAGTTTA TTGCTCTTGC TGAACGTTGT
GGTTTGATTG CAGGGTTAGA TTTAAGCGTT GCTAAACGAA TATGTATATT ATTACAGCAA
GCAGATGAGC AGGGTTTATC TCTTCCTCGT ATAACGATCA ATATTAGCGC GTTATCATTT
TGTCAGATTG ATTTTATTGA GCATTTAATT GCTTTGATTC GTACGTATTC AATTCGTACT
AATCAACTTG GCATTGAATT AAATGAATCT GCACTACTCT TACAAGATGC TTTTGTGAAT
GAACGTATTA CCCAGTTAGT GGAGATTGGG GTGCCAGTCA TTCTAGATAA CTTTGGTTCA
GGTCACGCTG CGTTAAGCTG CTTAAATCAG TATCCGATAA GCGAAGTAAA GTTAGATCTG
AGTTGTGTCG CTTCTATTAC CTCGACGCAG ATATGGCAAA AAGCATTAAT TCAATCAGTA
TTACCATTCG ACCTATGCTT AGTGGCTAAA GGTATAGAGT CAGCACAGCA ACAACAGATA
TTTACGGCAT TAGGTTGCCA TGCTTATCAA GGCTATTATT ATAGCCGAGC ACTAAATTTT
GCTGATTTTA AACAACTTTT CCATTCGAAT TCTTTGTTGC GTAGCGTTTA A
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| Protein sequence | MLRKLSLAVL IPLCMLILYL VLVIGEYLYE SDQIRSELAG RQVTQIKQQL LRMQAVVQSA
QVLQDIERIE QEVSLAALDM NTMVYILVDM DSRIRFANHT VWRDSNAIQV IDGYDVVRHH
TVAQSSLPQV SVNMERLTIQ AYYPVISQYP GAVELIYLES DLAPLVSEAS AKLQQRFIRV
WGLGGLLLIG FTLILYFLLI KPFRILSESA KHIGTPEFST QIPWSSSEVL SLQSSLQEVH
ARLGRAVKQL NDSEQRWLFA VEGSRNGIWD WDISTGEVFL SDRWKEMIGY APDELECVFK
TWESRLHPED RETVLDCLQE YISGKSKEFE SVHRLRHRDG HYIWVLDRGM LVDWDHLGRP
MRMIGIHVDV SESEKNHAAI AELVEHSVAG HRMLPAVFME RLSQFLTQED NSGHWGGLFF
IEVESLGVMN SLTSHEAERL FTQIGARLSS YFTDNIIVGH LELGRFTLLA KELSIDAEVA
ARRTLALATE LRQIIARPFH YRDHHFELNA NVGIYLLDPV ETLEPLLVIR RAELAQKHAK
LLGQCGCAFY HSELDVRQSR DELLQHELKL AIEHEKLSLM FQPIVNVAGE ILSAEVLSRW
YLANGDVVPP SEFIALAERC GLIAGLDLSV AKRICILLQQ ADEQGLSLPR ITINISALSF
CQIDFIEHLI ALIRTYSIRT NQLGIELNES ALLLQDAFVN ERITQLVEIG VPVILDNFGS
GHAALSCLNQ YPISEVKLDL SCVASITSTQ IWQKALIQSV LPFDLCLVAK GIESAQQQQI
FTALGCHAYQ GYYYSRALNF ADFKQLFHSN SLLRSV
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