Gene Sputcn32_3908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3908 
Symbol 
ID5081338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp4535690 
End bp4536313 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content44% 
IMG OID640501120 
Productcytochrome c, class I 
Protein accessionYP_001185413 
Protein GI146294989 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGT TAGCTCTTGC GCTGTCTGTT GTAGTTGCCG CCATATCTTC ACCTGCGATT 
GCTGAAGGTA ATGCTGAAGC GGGAAAAACT AAAATTATCG TTTGCTCAGC CTGCCATGGC 
ATGGACGGTA ACAGCATGAT CGATATGTAC CCTAAGCTTG CTGGCCAACA CGGCACTTAT 
CTCCAGAAGC AATTACACGA TTTCCGTAGC GCAGCGCAAA CTGGTGGTAA AAACGGTCGT 
ATGGATCCTA TCATGGGTGG TATGTCTATA GCTCTAAGCG ATCAAGATAT TCTCGACATT 
AGCGCATATT TTGCGAGTCA AACAGTTCAA GTTGGTGAAG TAAAAGATAT CCCAGAGCTC 
GGCGCTCAAC TCTACAAAGG CGGTGACGTT TCCCGTGGTA TTACCGCCTG CATGGCATGT 
CATGGTCCTG ATGCAAAAGG TGCTGAATTA GCAGGTTTTC CAACGCTTGC AGGCCAACAT 
GCAAACTATA TCAAAATTCA ACTCACCAAA TTCCGTGATG CTGGACGCAA TAATGACTTG 
AATGGCATGA TGCAAGATGT AGCTAAAAAG TTAAATGATA ACGATATTGA TGCGTTATCC 
AAATATCTAT CAAGTTTAAA ATAA
 
Protein sequence
MKKLALALSV VVAAISSPAI AEGNAEAGKT KIIVCSACHG MDGNSMIDMY PKLAGQHGTY 
LQKQLHDFRS AAQTGGKNGR MDPIMGGMSI ALSDQDILDI SAYFASQTVQ VGEVKDIPEL 
GAQLYKGGDV SRGITACMAC HGPDAKGAEL AGFPTLAGQH ANYIKIQLTK FRDAGRNNDL 
NGMMQDVAKK LNDNDIDALS KYLSSLK