Gene Sputcn32_3875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3875 
Symbol 
ID5081257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp4499030 
End bp4499689 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content44% 
IMG OID640501087 
Producthypothetical protein 
Protein accessionYP_001185380 
Protein GI146294956 
COG category[S] Function unknown 
COG ID[COG1738] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00697] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0609678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAATGT TAACTACAGC GCAGCTCCGC CGCGCCTTAC TCCTATTAGT AGGATTCCAT 
ATACTGATTA TTTGCGTCAG CAATTACTTA GTACAATTAC CATTTCAGCT GTTTGGCTAC
CATACCACTT GGGGTGCATT TAGCTTTCCA TTTGTGTATT TAGCGACCGA TCTCACAGTA
CGCATTTTTG GCCAACAGGC CGCCCGAAAT ATCATCCTCA AGGCGATGGT CCCTGCGTTG
ATGATTTCCT ATGTAATGGG GGTGCTATTC CATCAAGGTA GTTTTCAAGG CGCTGATTCA
CTTGCACAAT GGAACACATT TGTTTTCCGC ATTGCCTTTG CCAGCTTTGC GGCTTATTTG
ATTGGCCAAC TGATGGATAT CACAGTATTT GCTCGCATAC GAAAAAGTCG TTCTTGGTGG
GTTGCGCCAG CGGCATCCAC TCTAGTGGGT AATTTCGTCG ATACTTTAGT CTTCTTTAGC
GTGGCTTTTT ACGCTTCATC CGATAGCTTT ATGGCATCTC ACTGGCCTGA AATTGCCACT
GTCGATTACA GTTTTAAGCT ACTCGTCAGC TTAGGACTAT TTTTACCCGC CTATGGTGTT
TTGCTCAAAG TCTTACAAGA TAGGATTTTG CAAACCAGTC CGCAAAAATC ACTTTCCTGA
 
Protein sequence
MLMLTTAQLR RALLLLVGFH ILIICVSNYL VQLPFQLFGY HTTWGAFSFP FVYLATDLTV 
RIFGQQAARN IILKAMVPAL MISYVMGVLF HQGSFQGADS LAQWNTFVFR IAFASFAAYL
IGQLMDITVF ARIRKSRSWW VAPAASTLVG NFVDTLVFFS VAFYASSDSF MASHWPEIAT
VDYSFKLLVS LGLFLPAYGV LLKVLQDRIL QTSPQKSLS