Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3875 |
Symbol | |
ID | 5081257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 4499030 |
End bp | 4499689 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640501087 |
Product | hypothetical protein |
Protein accession | YP_001185380 |
Protein GI | 146294956 |
COG category | [S] Function unknown |
COG ID | [COG1738] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00697] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0609678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAATGT TAACTACAGC GCAGCTCCGC CGCGCCTTAC TCCTATTAGT AGGATTCCAT ATACTGATTA TTTGCGTCAG CAATTACTTA GTACAATTAC CATTTCAGCT GTTTGGCTAC CATACCACTT GGGGTGCATT TAGCTTTCCA TTTGTGTATT TAGCGACCGA TCTCACAGTA CGCATTTTTG GCCAACAGGC CGCCCGAAAT ATCATCCTCA AGGCGATGGT CCCTGCGTTG ATGATTTCCT ATGTAATGGG GGTGCTATTC CATCAAGGTA GTTTTCAAGG CGCTGATTCA CTTGCACAAT GGAACACATT TGTTTTCCGC ATTGCCTTTG CCAGCTTTGC GGCTTATTTG ATTGGCCAAC TGATGGATAT CACAGTATTT GCTCGCATAC GAAAAAGTCG TTCTTGGTGG GTTGCGCCAG CGGCATCCAC TCTAGTGGGT AATTTCGTCG ATACTTTAGT CTTCTTTAGC GTGGCTTTTT ACGCTTCATC CGATAGCTTT ATGGCATCTC ACTGGCCTGA AATTGCCACT GTCGATTACA GTTTTAAGCT ACTCGTCAGC TTAGGACTAT TTTTACCCGC CTATGGTGTT TTGCTCAAAG TCTTACAAGA TAGGATTTTG CAAACCAGTC CGCAAAAATC ACTTTCCTGA
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Protein sequence | MLMLTTAQLR RALLLLVGFH ILIICVSNYL VQLPFQLFGY HTTWGAFSFP FVYLATDLTV RIFGQQAARN IILKAMVPAL MISYVMGVLF HQGSFQGADS LAQWNTFVFR IAFASFAAYL IGQLMDITVF ARIRKSRSWW VAPAASTLVG NFVDTLVFFS VAFYASSDSF MASHWPEIAT VDYSFKLLVS LGLFLPAYGV LLKVLQDRIL QTSPQKSLS
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