| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3818 |
|---|
| Symbol | |
|---|
| ID | 5081152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 4431163 |
|---|
| End bp | 4432161 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640501030 |
|---|
| Product | permease |
|---|
| Protein accession | YP_001185323 |
|---|
| Protein GI | 146294899 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0701] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCAAC TATTTTCCGA TTTAGCGAGC TGGTTAACCT TTGGGGTGAT GGGCCTAGAT
CCCAATACTA AGCTTGCAGA TGCGGTACAT TTTTTTATTG AAGATACCAC TAAGATTTTT
GCACTCCTGT TGCTGATGAT TTATGCCATC GCCTTGGTGC GGGCATCGCT CAATGTTGAG
CGGGTGCGGG ATTACTTAGC GGGTAAAAAT CGCTTTATTG GGTATTTTAT GGGCTCGGGC
TTCGGCGCTG TGACCCCATT CTGCTCATGT TCGAGCATTC CGGTATTTTT AGGTTTTACC
TCCGCGGGGA TCCCTGTGGG GATCACTATG GCGTTTTTGA TCACGTCACC GTTAATTAAT
GAAGTGGCCG TTCTGCTGCT GGTAAGTCTG TTGGGCTGGA AGTTCACAGT GATATACGTG
TTGGTCGGTA TGTCGGTGGG GATACTCGCG GGCGCCTTTT TAGACACGAT CCGCGCCGAA
CGTTGGCTGC AGTCCTTTGC GGCAAAAGCG CTTGAACAAG GTCAGGCGCA GGCGAGTCAA
GATAATAGCG AGGATATGAC ATCAACATCC ATGACCTTCA CCGAGCGACA TGAGTTTGCA
AAAGGCGAGA CCCTAGAGAT TTTTGGTCGG GTGTGGAAAT GGGTCATTAT TGGGGTCGGG
CTTGGCGCCG CGCTCCATGG TTTTGTCCCC GATGGTTGGA TTGAAGCCCA CCTTGGCGAT
GGTCAGTGGT GGTCGGTTCC TGCCGCGGTA TTGATTGGTA TTCCCCTATA TTCCAATGCG
ACAGGTGTCA TTCCTATCAT GGAAAGCCTT ATTACTAATG GTCTTCCCAT AGGCACGACA
TTGGCATTTT GTATGGCTAC AGTAGCCGCG AGTTTCCCTG AATTTATTTT ACTAAAACAG
GTGATGCAAT GGCGTTTACT GGCCATTGTT TTTGCCATTT TATTGATTGC ATTCACCCTG
ATAGGGTGGA TATTTAACGC TATCAGTCCC ATGCTGTGA
|
|---|
| Protein sequence | MLQLFSDLAS WLTFGVMGLD PNTKLADAVH FFIEDTTKIF ALLLLMIYAI ALVRASLNVE
RVRDYLAGKN RFIGYFMGSG FGAVTPFCSC SSIPVFLGFT SAGIPVGITM AFLITSPLIN
EVAVLLLVSL LGWKFTVIYV LVGMSVGILA GAFLDTIRAE RWLQSFAAKA LEQGQAQASQ
DNSEDMTSTS MTFTERHEFA KGETLEIFGR VWKWVIIGVG LGAALHGFVP DGWIEAHLGD
GQWWSVPAAV LIGIPLYSNA TGVIPIMESL ITNGLPIGTT LAFCMATVAA SFPEFILLKQ
VMQWRLLAIV FAILLIAFTL IGWIFNAISP ML
|
|---|
| |