| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3800 |
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| Symbol | |
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| ID | 5081134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4410619 |
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| End bp | 4411407 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640501013 |
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| Product | competence protein ComF |
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| Protein accession | YP_001185306 |
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| Protein GI | 146294882 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
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| TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCACA TTGTCAAAGG GATTTGGCCG CAATCTGCTT TGCGGATAAT GCGTCTAGGA
TATCAACTCT GCATAACTTG GTTGGCGGGC AGTTTACCTA ACCGTTGTCT TCTGTGCCAC
CAATCCATGC AAGCGCCAGA AACGGGGATT TGTATGGCTT GCCTACAAAC GGGTTTATAC
CATAGTCCCA TTTGTCTTGG TTGTGGCAGG TCAATGCTGC TTGAAATGGA TTATTGCGGT
GCATGCCAAA AATATTCACC CCATAAGATC GTTGCCCCCT GCAGTTATCA CCAAGGTTTA
GGGACTTGGG TTGGTGCAAT TAAGTACCAA GGTCAACTTG CGGCATTGCC CGTACTCTGT
CGTGCCTTGG TTGCGCGAAT TAACCACCTT GAGCAGTTGG GCTTATTAAC GCTTCCCCAA
GCGATAGTAC CAGTGCCATT GCACCCCAAA CGCTTACAGC AAAGAGGGTT TAATCAGGCT
TGGTTGATTG CCCATGAGTT GTCTCAACGC TTACAGTTGC CCTTAGTTGA CCAAGGATTA
ACGCGGCGAC AGGATACCCG TCCGCAGGCA GGATTGAACG GTGCGCAACG GCGGCGTAAT
CTACAGGATG CATTTATGTT AGATGATGAC TTTGCTTATC AGCGTATTGC ACTGGTAGAC
GATGTCGTCA CAACGGGGAC CACAGTCGCT GAAATTGCCC GTTTATTTGA AGCGCGATAC
GTGCATGTTC AAATATGGTG TCTTGCACGA GCCGAAGCGC CAGGTTTGTT GGATACAACG
GACTTATAA
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| Protein sequence | MPHIVKGIWP QSALRIMRLG YQLCITWLAG SLPNRCLLCH QSMQAPETGI CMACLQTGLY
HSPICLGCGR SMLLEMDYCG ACQKYSPHKI VAPCSYHQGL GTWVGAIKYQ GQLAALPVLC
RALVARINHL EQLGLLTLPQ AIVPVPLHPK RLQQRGFNQA WLIAHELSQR LQLPLVDQGL
TRRQDTRPQA GLNGAQRRRN LQDAFMLDDD FAYQRIALVD DVVTTGTTVA EIARLFEARY
VHVQIWCLAR AEAPGLLDTT DL
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