Gene Sputcn32_3759 details

Gene Information

• Locus tag: Sputcn32_3759
• Symbol: rplC
• ID: 5081039
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: -
• Start bp: 4360920
• End bp: 4361558
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640500968
• Product: 50S ribosomal protein L3
• Protein accession: YP_001185265
• Protein GI: 146294841
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000000000358076
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTATCG GTCTTATTGG TCGTAAAGTT GGTATGACTC GCATCTTTAC TGAAGATGGT 
GTTTCAATAC CTGTTACAGT AATTGAAGTT GCTGGCAACC GTGTTACTCA AGTGAAAACT 
TTAGAAACTG ACGGCTACCG CGCGCTTCAA GTTACTACTG GTACCAAAAA AGCCAATCGC 
ATTACTAAAC CAGAAGCAGG TCACTTTGCC AAGAGCGGTG TTGAAGCCGG TCGTGGATTG 
TGGGAAGTGC GTCTGGAAGA CGGTGAAGGC GAGGGCATTG AAGTTGGTGC TGAGCTAAAT 
GTTGATATTT TCGCTGATGT AGCGAAAGTT GATGTTACTG GTCAATCAAA AGGTAAAGGT 
TTCCAAGGCG GCGTTAAGCG TTGGAACTTC CGTACTCAAG ATATGACTCA CGGTAACTCT 
TTGTCGCACC GCTCGAATGG TTCTATTGGT CAGAACCAAA CGCCTGGTCG CGTATTCAAA 
GGCAAGAAAA TGTCAGGCCA TATGGGTGCC GAGCGTGTTA CTACTCAAAA TCTAGTTGTA 
GTTCGTGTAG ATGTTGAGCG TAACCTGCTA CTAGTCCGTG GCGCTGTTCC TGGCGCTACC 
AATGGCGACT TGATTATCAA GCCTGCCGTT AAAGCTTAA 

 

Protein sequence

MAIGLIGRKV GMTRIFTEDG VSIPVTVIEV AGNRVTQVKT LETDGYRALQ VTTGTKKANR 
ITKPEAGHFA KSGVEAGRGL WEVRLEDGEG EGIEVGAELN VDIFADVAKV DVTGQSKGKG 
FQGGVKRWNF RTQDMTHGNS LSHRSNGSIG QNQTPGRVFK GKKMSGHMGA ERVTTQNLVV 
VRVDVERNLL LVRGAVPGAT NGDLIIKPAV KA