| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3758 |
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| Symbol | rplD |
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| ID | 5081038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4360297 |
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| End bp | 4360902 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640500967 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_001185264 |
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| Protein GI | 146294840 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000815073 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAATTGG TATTGAAAGA CGCGCAAAGC GCTCTTGAAG TTTCCGAAAC TACCTTCGGC
CGTGACTTTA ACGAGGCACT GGTTCATCAG GTAGTTGTAG CATACGCTGC AAACGCGCGT
CAGGGCACTC GTGCTCAAAA GACTCGTGCG GAAGTAACTG GCTCAGGCAA AAAGCCTTGG
CGCCAAAAAG GAACTGGCCG TGCTCGTGCT GGTTCTGTTA AAGGCCCAAT CTGGCGTGGC
GGTGGCGTAA CATTCGCTGC TAAAACCCAA GATCATAGCC AAAAAGTTAA CAAAAAGATG
TACCGCGGCG CGCTGAAAAG CATTCTGTCT GAATTGGTAC GTCAAGAGCG TTTAGTTGTT
GTTGAATCTT TCGGTGTTGA AGCTCCTAAA ACTAAAGAGC TGAAAGCGAA ATTAAAAGCA
ATGAACTTAG AAGACGTTCT AATTGTGACT GCAGAAGTTG ATGAGAATTT ATTCTTAGCA
GCTCGTAACC TGTACAAGGT TGACGTTCGT GACGTAGCGG GTCTAGACCC TGTAAGTCTG
ATCGCGTTCA ACACTGTGCT TGTGACTGCT GACGCAGTGA AGCAAATCGA GGAGATGCTA
GCATGA
|
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| Protein sequence | MELVLKDAQS ALEVSETTFG RDFNEALVHQ VVVAYAANAR QGTRAQKTRA EVTGSGKKPW
RQKGTGRARA GSVKGPIWRG GGVTFAAKTQ DHSQKVNKKM YRGALKSILS ELVRQERLVV
VESFGVEAPK TKELKAKLKA MNLEDVLIVT AEVDENLFLA ARNLYKVDVR DVAGLDPVSL
IAFNTVLVTA DAVKQIEEML A
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