| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3754 |
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| Symbol | rplV |
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| ID | 5081034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4358513 |
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| End bp | 4358845 |
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| Gene Length | 333 bp |
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| Protein Length | 110 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640500963 |
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| Product | 50S ribosomal protein L22 |
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| Protein accession | YP_001185260 |
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| Protein GI | 146294836 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0091] Ribosomal protein L22 |
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| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000037277 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAGTTT TAGCTAAACA TCGTTTTGCC CGTACGTCTG CGCAGAAGGC CCGTCTGGTT
GCCGATCAAA TTCGTGGTTT GCCTGTTGCT AAGGCCCTCG AAATATTGAC TTTCAGCCCG
AAAAAAGCCG CCGTACTGGT TAAAAAAGTA CTTGACTCAG CTATCGCAAA CGCCGAACAC
AACGAAGGTG CGGATATTGA TGAGCTAAAA GTAGGAGCCG TCTTTGTAGA CGAGGGTCCA
ACTATGAAGC GTATCATGCC ACGTGCTAAA GGCCGCGCTG ATCGTATCAT GAAGCGTACC
AGCCACATTA CTGTGGTTGT ATCAGATCGC TAG
|
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| Protein sequence | MEVLAKHRFA RTSAQKARLV ADQIRGLPVA KALEILTFSP KKAAVLVKKV LDSAIANAEH
NEGADIDELK VGAVFVDEGP TMKRIMPRAK GRADRIMKRT SHITVVVSDR
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