| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3745 |
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| Symbol | rpsH |
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| ID | 5079132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4354792 |
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| End bp | 4355184 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640500954 |
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| Product | 30S ribosomal protein S8 |
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| Protein accession | YP_001185251 |
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| Protein GI | 146294827 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0096] Ribosomal protein S8 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000380848 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCATGC AAGATCCTAT TGCGGATATG TTAACCCGTA TTCGTAACGG CCAAGCTGCT
AACAAAGTAT CTGTGAAGAT GCCTTCTGCT AAGTTGAAAG TCGCTATTGC GAAACTGCTT
AAAGAAGAAG GCTACATCGC TGATTACGCC GTAGCAGATG AAGCCAAGCC TGAACTGGAA
ATTACGTTAA AGTATTTCCA AGGCCAACCA GTCGTTGAGA CTATCCAGCG CGTAAGTCGT
CCTGGTCTTC GTATTTACAA AGGTAAAAAC GAACTTCCAA AGGTGATGGG CGGACTGGGT
GTCGCAATTG TGTCCACTTC TAAAGGCTTG ATGACTGATC GTGCCGCCCG CCTTGCTGGC
ATGGGTGGCG AGGTTATCTG CTACGTAGCA TAA
|
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| Protein sequence | MSMQDPIADM LTRIRNGQAA NKVSVKMPSA KLKVAIAKLL KEEGYIADYA VADEAKPELE
ITLKYFQGQP VVETIQRVSR PGLRIYKGKN ELPKVMGGLG VAIVSTSKGL MTDRAARLAG
MGGEVICYVA
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