Gene Sputcn32_3745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3745 
SymbolrpsH 
ID5079132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp4354792 
End bp4355184 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content47% 
IMG OID640500954 
Product30S ribosomal protein S8 
Protein accessionYP_001185251 
Protein GI146294827 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.80848e-09 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATGC AAGATCCTAT TGCGGATATG TTAACCCGTA TTCGTAACGG CCAAGCTGCT 
AACAAAGTAT CTGTGAAGAT GCCTTCTGCT AAGTTGAAAG TCGCTATTGC GAAACTGCTT
AAAGAAGAAG GCTACATCGC TGATTACGCC GTAGCAGATG AAGCCAAGCC TGAACTGGAA
ATTACGTTAA AGTATTTCCA AGGCCAACCA GTCGTTGAGA CTATCCAGCG CGTAAGTCGT
CCTGGTCTTC GTATTTACAA AGGTAAAAAC GAACTTCCAA AGGTGATGGG CGGACTGGGT
GTCGCAATTG TGTCCACTTC TAAAGGCTTG ATGACTGATC GTGCCGCCCG CCTTGCTGGC
ATGGGTGGCG AGGTTATCTG CTACGTAGCA TAA
 
Protein sequence
MSMQDPIADM LTRIRNGQAA NKVSVKMPSA KLKVAIAKLL KEEGYIADYA VADEAKPELE 
ITLKYFQGQP VVETIQRVSR PGLRIYKGKN ELPKVMGGLG VAIVSTSKGL MTDRAARLAG
MGGEVICYVA