Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3700 |
Symbol | |
ID | 5079034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4309012 |
End bp | 4309722 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640500907 |
Product | ribulose-phosphate 3-epimerase |
Protein accession | YP_001185207 |
Protein GI | 146294783 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCACT TTTTGTTCAA TTACAGCGAG TGTTTTATGC GTCCATTCTT AATTGCTCCA TCGATTTTAT CCGCCGATTT TGCCCGTTTA GGGGATGATG TTAAAGCCGT ATTAGATGCG GGCGCTGACG TAGTGCATTT TGATGTGATG GATAATCACT ATGTGCCTAA TCTGACGATT GGCCCTATGG TGTGTAAAGC CCTACGTGAT TATGGCATTA CCGCCGATAT CGATGTGCAT CTTATGGTGA AACCCGTTGA CCGTATCGTG CCTGATTTTG CTAAGGCTGG CGCTTCTATC ATTACTTTCC ATCCAGAAGC CTCTGAGCAT GTCGACCGTA CACTGCAATT AATCAAAGAA TCAGGTTGTA AGGCGGGCTT AGTATTTAAC CCTGCGACGC CATTGCATTA CCTCGACCAT GTGATGGATA AACTCGATGT GATCCTATTG ATGTCGGTGA ATCCTGGTTT TGGTGGTCAA TCCTTTATTC CATCAACCTT AGATAAGCTG CGCCAAGTGC GTGCGCGTAT TGATGCCAGT GGTTTTGATA TTCGTTTAGA AGTCGATGGT GGTGTGAAGG TCGACAATAT CGCCGAAATC GCTGCGGCGG GTGCGGACAT GTTTGTGGCT GGCTCGGCTA TTTTCGGCAA GCCCGATTAT AAGGCCGTTG TTGATGAGAT GCGTGCCGAA CTGGCTAAAG TTGGGGCATA G
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Protein sequence | MKHFLFNYSE CFMRPFLIAP SILSADFARL GDDVKAVLDA GADVVHFDVM DNHYVPNLTI GPMVCKALRD YGITADIDVH LMVKPVDRIV PDFAKAGASI ITFHPEASEH VDRTLQLIKE SGCKAGLVFN PATPLHYLDH VMDKLDVILL MSVNPGFGGQ SFIPSTLDKL RQVRARIDAS GFDIRLEVDG GVKVDNIAEI AAAGADMFVA GSAIFGKPDY KAVVDEMRAE LAKVGA
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