| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3681 |
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| Symbol | |
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| ID | 5079014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 4289799 |
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| End bp | 4290953 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640500887 |
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| Product | porin |
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| Protein accession | YP_001185188 |
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| Protein GI | 146294764 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAGA CTTGCATCGC CTTAGTGCTT CCCGTGCTGT TGACCGCCAC CAGCAGCCAA
GCAATTGAAC TATATAAAGA CTCAAAAAAT TCATTAGATT TGAGTGGCTG GCTTGGATTT
GCCGCATTAA ATGATAGCCA TGATACTTCC GTTATTGACG ATTTATCCCG CGTACGATTT
AGCTTCGAAC GCAATGAAAA ACATGGTTGG ACGGCTTTTG CGACGACCGA ATGGGGTATC
AATATGGTGT CTAGCGATGA CAGCCTAGTG ATGCAAGGCG GTAAACTCGC TGCAGAAAAA
AACGAAGATT TCCTCTATAA CCGTTTAGGT TATGTCGGTA TGTCCCACGA TGAGTGGGGG
AGCCTAAGTT TTGGTAAGCA ATGGGGCGTA TATTACGACA TCGCAGGCAC CACAGATCTA
CCCAACGTCT TTGCAGGATA CAGTGTTGGC GCCTATGCCT TTAGTGATGG TGGATTAACA
GGAACAGGCC GAGCTGACTC TGCATTTATC TACCGCAATA CGCTCGGCCC AGTGCACATT
GCCCTACAAT ACGCCGCCAA AACCAATGGG GATATCGTCC TTAAAAATGC CGATGGCAGC
GAAATGGCAG ACTCTGAACT CAATTTCGAC AGCAGCTACG GTGCCAGCCT GACCTATTCG
GTAACGGACA AATTTAAGCT GCTGGCGGGC TTTAACCGCG GTGATTTTGA CGGTCACCTA
GGTAATACCC AAGTTGATGA AACAAATAAG ATTGTCGGTA TTGGTGCTAT GTACGGTGAT
TATTATCACT ATGCCGAAAA TCGCGAAGCA AGTGGCCTCT ATGTCGGCTT TAACGCCCAT
CAAAGTAAAA ACAATGAACT AGTGGATGGC GAACTTTACG ATGCAACTGG CGTCGAGCTA
ATGACGGCCT ATCAATTTGA TAATGGCTTT GTACCTATGT TGGTGCTCAG TTATTTAGAT
TTAGATACAG ATGCAACCAC ACCTATCCAA GGTAAATGGA CCCGCCAATT TGCCATGTTA
GGACTGCATT ATCGCTACAG TAACGACACT GTGATGTTTG CCGAGATGAA ACTGGATTTT
AGCAAAATGG ATGACGCTGC ACTCGAAGCG CTGGAAGACA ACGGCTTTGC GGTGGGGATT
AACTACTTCT TCTAG
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| Protein sequence | MNKTCIALVL PVLLTATSSQ AIELYKDSKN SLDLSGWLGF AALNDSHDTS VIDDLSRVRF
SFERNEKHGW TAFATTEWGI NMVSSDDSLV MQGGKLAAEK NEDFLYNRLG YVGMSHDEWG
SLSFGKQWGV YYDIAGTTDL PNVFAGYSVG AYAFSDGGLT GTGRADSAFI YRNTLGPVHI
ALQYAAKTNG DIVLKNADGS EMADSELNFD SSYGASLTYS VTDKFKLLAG FNRGDFDGHL
GNTQVDETNK IVGIGAMYGD YYHYAENREA SGLYVGFNAH QSKNNELVDG ELYDATGVEL
MTAYQFDNGF VPMLVLSYLD LDTDATTPIQ GKWTRQFAML GLHYRYSNDT VMFAEMKLDF
SKMDDAALEA LEDNGFAVGI NYFF
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