Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3667 |
Symbol | |
ID | 5079000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4272124 |
End bp | 4272906 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640500873 |
Product | ABC transporter related |
Protein accession | YP_001185174 |
Protein GI | 146294750 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4604] ABC-type enterochelin transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATAACCG TCAATAACTT ATATCAGTCT TATGGCGCGA AACCTGTGCT AAAAAATGTC ACTGCACAAT TTCCCGAACA TCAGATGACT TCTCTCATCG GCCCCAACGG TGCCGGCAAA AGTACCTTAC TGATGTCGAT TGGTCGGTTA CTGAATATCC AGCAGGGCGA GGTATTACTC AAAGGTACTG CTATCCACAA TATTCCCTTG AAGGATTATG CCAAGCAAGT GGCAACCATG CGTCAGTTTA ACAGCCTCAA TTTACGCCTG ACGGTCAGGG AGTTAGTGGC ATTTGGTCGT TTTCCCTATA GCCAAGGGGC ACTCACAAAG GAAGATCATC GCACCATTGA TGAAGCGCTG TCGTTTTTAG CTTTACAGTC ATTAGCCAAT GTATTTATTG ATGAACTTAG CGGCGGACAA CGCCAAATGG CTTTTCTGGC AATGGCGATT GCGCAGCAAA CGGATTATTT ATTGTTAGAT GAACCGCTCA ACAATTTGGA TATGAAACAT GCCGTTAGCA TCATGCGGGC ACTTCGCCAT CTGTGTGACG ATTACAAACG AACGGTAGTG TTAGTGGTTC ACGATATCAA TTTTGCGGCT AACTACTCCG ACTATATTGT CGGTATGAAG CAAGGCGTTG TGCACTGCGC TGGACCCGTT GAAGAGGTTG TTACAGCGCA AAGGCTGAAA GCCCTGTACG AACTGGATCT TGAGGTGCTG AAAACGAGTC AAGGAACGGT ATGTAACTAT TTCAACTTCA ACTTACAAGG AGAATACAAG TGA
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Protein sequence | MITVNNLYQS YGAKPVLKNV TAQFPEHQMT SLIGPNGAGK STLLMSIGRL LNIQQGEVLL KGTAIHNIPL KDYAKQVATM RQFNSLNLRL TVRELVAFGR FPYSQGALTK EDHRTIDEAL SFLALQSLAN VFIDELSGGQ RQMAFLAMAI AQQTDYLLLD EPLNNLDMKH AVSIMRALRH LCDDYKRTVV LVVHDINFAA NYSDYIVGMK QGVVHCAGPV EEVVTAQRLK ALYELDLEVL KTSQGTVCNY FNFNLQGEYK
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