| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3633 |
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| Symbol | |
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| ID | 5078923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 4233550 |
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| End bp | 4233933 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640500839 |
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| Product | putative endoribonuclease L-PSP |
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| Protein accession | YP_001185140 |
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| Protein GI | 146294716 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00280207 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAAA AAATCATTAT AGCGACCGAC AATGCCCCTG CGGCCATCGG CACCTATTCG
CAGGCCGTTA AAGTCGGTAG TACAGTGTAT TTATCAGGCC AGATCCCACT CGTGCCAAGC
ACAATGCAAA TTGTCAGTGA TGATTTTGAG GCCCAGGTTG TACAAGTATT TGAAAACTTA
ACGGCCGTCT GCAACGCAGC AGGTGGGTCA ATTAACGATA TCGTTAAGCT CAATATCTTC
CTGACTGATT TAAGCCACTT CGCTAAAGTG AATGAAATCA TGAGTCGCTA CTTCAGCCAA
CCTTATCCTG CTCGCGCCGC AATTGGTGTA AAGCAGCTGC CTAAGGATTC ACAGGTTGAA
ATGGACGGCG TGATGGAGCT GTAA
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| Protein sequence | MAEKIIIATD NAPAAIGTYS QAVKVGSTVY LSGQIPLVPS TMQIVSDDFE AQVVQVFENL
TAVCNAAGGS INDIVKLNIF LTDLSHFAKV NEIMSRYFSQ PYPARAAIGV KQLPKDSQVE
MDGVMEL
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