| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3632 |
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| Symbol | |
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| ID | 5078922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 4231419 |
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| End bp | 4233524 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640500838 |
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| Product | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase |
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| Protein accession | YP_001185139 |
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| Protein GI | 146294715 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0294731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTATCTGT TTGAAGGTCT AAAGGAGTCT GCTTCCGGTT ACTTAGAACC TGAACAGGTA
GAATTACTCA AGCAGGCGTA CCAGATTGCG CGTGATGCCC ATGAAGGGCA AATGCGTACT
AGCGGCGAAC CTTATATTAC TCATCCGGTT GCGGTTGCTC GCATCCTTGC CGAAATGCGT
CTCGACCACG AGACGCTGAT GGCGGCTCTG CTCCACGACA CTATCGAAGA TACGCATGTC
ACCAAAGAAG ACTTGGCAGA GCGCTTTGGT GAGTCTGTGG CAGAGCTGGT CGAAGGTGTG
TCAAAACTCG ATAAGCTTAA ATTTCGCGAT AAGAAAGAAG CGCAAGCCGA AAACTTTCGT
AAAATGATGA TGGCGATGAC GCAGGATATC CGCGTTATCC TCATCAAGCT TGCCGATCGC
ACCCACAATA TGCGTACCTT AGGCGCACTA CGTCCAGACA AACGTCGCCG TATCGCCCGC
GAAACCTTAG AAATCTACGC GCCCATCGCC AATCGTCTTG GTATCCACAA TATCAAAACC
GAGTTAGAAG ACTTAGGTTT TCAAGCTTAT TATCCAATGC GATATCGGGT GCTTAAAGAA
GTGGTTAAAG CCGCCCGTGG CAATCGTAAA GAATTAATTC AGGGCATTGA AGCCGCTGTA
TATACCCGCT TAAACGATGC AGGTATTCCG GGCAAAGTGA AAGGTCGAGA AAAAAATCTT
TATTCCATCT ATAACAAGAT GCAGAGTAAA GAGCTGCAAT TCCAAGAAGT CATGGATATC
TACGCCTTCA GGGTGATAGT CGATTCCATC GATACTTGCT ACCGCGTACT CGGCGCCATG
CATGGCCTTT ACAAGCCTCG TCCCGGTCGG TTCAAAGATT ATATCGCTAT CCCTAAAGCC
AACGGTTATC AGTCACTCCA TACCTCCTTG TTTGGCCCAC ACGGCGTCCC CGTTGAAATT
CAAATTCGTA CCGAAGATAT GGATCAAATG GCCGACAAAG GGGTCGCTGC ACACTGGGCC
TACAAAGGCG GTGCTGAAGC CGGTCAAGGT ACAACCACCC AAGTACGCGC CCGCAAGTGG
ATGCAAAGCT TGTTGGAATT ACAACAAAGT GCCAGTACCT CATTCGAATT CGTTGAGAAC
GTGAAAACAG AACTCTTCCC CGAAGAGATT TATGTGTTCA CCCCCGAAGG TCGCATTTTG
GAATTACCCG TCAATGCCAC CGCGGTCGAT TTTGCCTACG AAGTGCACAC TGATGTCGGT
AATACTTGCG TAGGTGCCCG CGTGAATCGC CAAGCTTACC CGCTCAGTCA GCCATTAATT
TCAGGTCAAA CCGTTGAAAT TATTACGGCT AAAGGTGCTC GTCCGAATGC GGCTTGGCTT
AACTTTGTAG TTACAGGTAA AGCCCGAGCC AAAATTCGCC AAGTGCTTAA AAGCCTTAAA
GGTGACGATG CGATCGCACT GGGTCGCCGT TTGCTAAACC ATGCGCTGGG TAAAACTAAG
CTCGACAGTA TTCCACCAGA GCAAATTGAA AAAGTGGTGC GTGATACTAA GCACGCTAAC
CTTAACGCCT TACTCGCCGA TATCGGTCTT GGTAATGCGA TGAGCATCGT TATCGCCCAA
CGTCTAATTG GCGATAACCT TGAAAATCAA GAGAGCCGCG ATGCGCACTT GATGCCAATC
CGTGGCGCCG AAGGTATGCT AGTCACCTTT GCAAACTGCT GTCGCCCCAT TCCTGGCGAT
GCCGTTATCG CCCACGTGAG TCCAGGTAAA GGCTTAGTGG TGCATATGGA AAACTGCGCC
AATATTCGCG GTTACCAAGG TGAACCTGAT AAATACATTC CTGTACAATG GGATAATGTT
GAAGGCGTTG AATATCAAGC AAATCTGCGG GTTGAGATCG TCAATCACCA AGGCGCACTG
GCAAAAATCA CTTCGATCAT TGCCGCCGAA GGTTCTAACA TTCATAACCT CAGCACTGAA
GAACGTGATG GCCGCGTGTA TCTGATTAAC CTGCGTATTT CGGTGAAGGA CAGGATCCAT
TTAGCCAACG TGATGCGCCG TATCCGAGTA CTTCCTGAAG TGTTACGTAC ATCCCGTAAT
CGTTAA
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| Protein sequence | MYLFEGLKES ASGYLEPEQV ELLKQAYQIA RDAHEGQMRT SGEPYITHPV AVARILAEMR
LDHETLMAAL LHDTIEDTHV TKEDLAERFG ESVAELVEGV SKLDKLKFRD KKEAQAENFR
KMMMAMTQDI RVILIKLADR THNMRTLGAL RPDKRRRIAR ETLEIYAPIA NRLGIHNIKT
ELEDLGFQAY YPMRYRVLKE VVKAARGNRK ELIQGIEAAV YTRLNDAGIP GKVKGREKNL
YSIYNKMQSK ELQFQEVMDI YAFRVIVDSI DTCYRVLGAM HGLYKPRPGR FKDYIAIPKA
NGYQSLHTSL FGPHGVPVEI QIRTEDMDQM ADKGVAAHWA YKGGAEAGQG TTTQVRARKW
MQSLLELQQS ASTSFEFVEN VKTELFPEEI YVFTPEGRIL ELPVNATAVD FAYEVHTDVG
NTCVGARVNR QAYPLSQPLI SGQTVEIITA KGARPNAAWL NFVVTGKARA KIRQVLKSLK
GDDAIALGRR LLNHALGKTK LDSIPPEQIE KVVRDTKHAN LNALLADIGL GNAMSIVIAQ
RLIGDNLENQ ESRDAHLMPI RGAEGMLVTF ANCCRPIPGD AVIAHVSPGK GLVVHMENCA
NIRGYQGEPD KYIPVQWDNV EGVEYQANLR VEIVNHQGAL AKITSIIAAE GSNIHNLSTE
ERDGRVYLIN LRISVKDRIH LANVMRRIRV LPEVLRTSRN R
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