| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3621 |
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| Symbol | |
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| ID | 5078911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 4220333 |
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| End bp | 4221229 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640500827 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001185128 |
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| Protein GI | 146294704 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCACT TTTCGGCATT ACCTATTTTT GTCACTGTAG TGGAATGCGG TAGTTTTTCC
GATGCAGGGC AAAAGCTTGG GCTGAGCAAA TCGGCAGTGA GTAAACGTAT TACCCTATTA
GAACAAAGTC TGGGTCTTCA ACTCCTGCAC CGTACTACTC GCAGCTTAAG CCTTACCGAA
GCGGGCGCCC GCTATTACAA CTATGTTTGC CCCGCCGTTC AGCTCGCCCA AGAAGGATTG
GATGCGATAT CCGAATTGCA ACAAGCACCC CAAGGTCATC TACGAATTTC GGTGCCTATG
GTGTTTGGTC GCGTGTATAT TGCGCCATTA ATAGCTGAGT TTTTAAGACG ATACCCTGAT
ATCCAGCTAC AAATGCACAT GGATGACAAG ACCACAGACT TAATTACTGG CGGCTTTGAT
TTAGCCATTC GTATCGGCGA ATTACCAGAC TCAAGCCTTA TCGCCCGTAA ACTCGCACCT
TGTTTAAGCG TCATTTGCGC CGCCAAAGAT TACCTCGCAC AACATGGCTT ACCCAGCACA
CCTGCGGCAT TAACACAGCA CAACTGCTTG TTTTACTCTT ATTTTCAAGA TGGTGTGGAA
TGGAGCTTCC AAAGTCCCAA TGGCGTGCAA CGCGTTCAGC CCAAAGGCAA CTATCAGGTC
AACAATAGTG ACGCCATCCA TCAAGCCTGC CTCGATGGCT TAGGTATCGC CAACCTACCG
CGATTTATTG TAGAGCCCGA TCTACAAACC GGACGTTTAC AGGCATTACT CACTGACTAT
CCGCTACCAG AACACGGTAT TTATGCGGTT TATCCGCAGC GGAAATATTT GCCGACAAAA
GTGAGCGTAT TGATAGCGTT TTTGATGGAG AAATTGACGA GTAGCAAGTT AGGGTAA
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| Protein sequence | MEHFSALPIF VTVVECGSFS DAGQKLGLSK SAVSKRITLL EQSLGLQLLH RTTRSLSLTE
AGARYYNYVC PAVQLAQEGL DAISELQQAP QGHLRISVPM VFGRVYIAPL IAEFLRRYPD
IQLQMHMDDK TTDLITGGFD LAIRIGELPD SSLIARKLAP CLSVICAAKD YLAQHGLPST
PAALTQHNCL FYSYFQDGVE WSFQSPNGVQ RVQPKGNYQV NNSDAIHQAC LDGLGIANLP
RFIVEPDLQT GRLQALLTDY PLPEHGIYAV YPQRKYLPTK VSVLIAFLME KLTSSKLG
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