| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3620 |
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| Symbol | |
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| ID | 5078910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4219347 |
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| End bp | 4220030 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640500826 |
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| Product | nucleotidase |
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| Protein accession | YP_001185127 |
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| Protein GI | 146294703 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR02254] HAD superfamily (subfamily IA) hydrolase, TIGR02254 |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTGC CATACCAATG GATTCTGTTC GATGCCGACG AAACCCTATT TTATTTCGAT
GCCTTAAAAG GGCTTAAGTT GATGTTTGGT GAGTTTGGGG TCGATTTTAC TCAAGCGGAT
TTTGATGAGT ATCAGTTAGT TAATAAACCG CTATGGGTTG ACTATCAAGA CGGTAAAATC
ACTGCTGCCG AATTGCAAAC CACACGTTTC GAGCCTTGGG CTGCCAAACT TGCGGTAGCG
CCGCAAGCGC TCAATAGTGC CTTTTTATCT GCTATGGCTG AAATTTGTGC GCCGCTACCT
GGTGCGCGCG AGTTGTTAGC CGCGCTGCAA GGTAAGGCTA AATTAGGCAT CATCACTAAC
GGTTTTACTG AGCTGCAAAC CGTGCGATTA GAGCGCACAG GCTTACAGCA TCATTTTGAT
ATTTTAGTGA TTTCAGAAAA AGTCGGCATG GCAAAACCCG ATGTGGGTAT CTTCGAACAT
GCCTTTGAAT TGATGGGGCA TCCTGAGCGT GAAACTGTAC TTATGGTCGG CGATAACCCG
CATTCCGATA TTCAAGGCGG TATCAATGCA GGGATTCATA CTTGTTGGTA TAACGTCCAT
GGCCACGATG TGCCCGCAGG GATTACTCCG CACTATCAAG TGCGCTCCCA TCAAGAACTG
CATAGTCTGT TGCTCGGGGT GTAA
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| Protein sequence | MSLPYQWILF DADETLFYFD ALKGLKLMFG EFGVDFTQAD FDEYQLVNKP LWVDYQDGKI
TAAELQTTRF EPWAAKLAVA PQALNSAFLS AMAEICAPLP GARELLAALQ GKAKLGIITN
GFTELQTVRL ERTGLQHHFD ILVISEKVGM AKPDVGIFEH AFELMGHPER ETVLMVGDNP
HSDIQGGINA GIHTCWYNVH GHDVPAGITP HYQVRSHQEL HSLLLGV
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