Gene Sputcn32_3612 details

Gene Information

• Locus tag: Sputcn32_3612
• ID: 5078902
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: -
• Start bp: 4209198
• End bp: 4211057
• Gene Length: 1860 bp
• Protein Length: 619 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640500818
• Product: dihydroxy-acid dehydratase
• Protein accession: YP_001185119
• Protein GI: 146294695
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAAGT TACGATCAGC TACCAGTACC GAAGGCCGCA ATATGGCGGG TGCCCGTGCG 
CTATGGCGCG CCACAGGGGT GAAAGACAAT GATTTTGGTA AGCCAATTAT CGCCATTGCT 
AACTCCTTTA CTCAGTTTGT ACCGGGTCAC GTGCACTTAA AAGACATGGG CTCACTGGTG 
GCGAGCGCCA TCGAAGAAGC GGGCGGTATC GCCAAAGAAT TCAATACAAT CGCCGTCGAT 
GACGGTATCG CCATGGGCCA CGGCGGCATG CTGTATAGCC TGCCATCGCG CGAGCTTATC 
GCCGACAGTG TGGAATACAT GGTTAACGCC CACTGCGCCG ATGCTTTAGT CTGTATCTCC 
AACTGCGACA AGATCACCCC TGGCATGTTG ATGGCGGCGC TGCGCCTCAA TATTCCCGTG 
GTGTTTGTGT CTGGCGGGCC GATGGAAGCG GGTAAAACTA AGTTGTCGGA TAAGCTCATC 
AAACTCGATT TAGTCGATGC TATGGTGGCG GGAGCCGACT CGAACGTGAG CGATGAAGAC 
AGTGCCAAAA TTGAGCGTAG CGCGTGCCCA ACCTGTGGCT CTTGCTCTGG CATGTTTACT 
GCCAACTCAA TGAACTGTTT AACCGAAGCC CTAGGGTTAT CGCTGCCGGG TAACGGCTCT 
ATGCTGGCAA CCCACGCGGA TCGCCGCGAG CTGTTTTTAG AAGCGGGTCG CCGCGTGATG 
GTGCTGGCAA AACGTTATTA TCATCAAGAT GATGAATCGG CATTGCCGCG CAATATTGCG 
AACTTTAAAG CCTTCGAAAA TGCCATGACT TTAGATATCG CCATGGGCGG TTCATCTAAT 
ACCGTATTGC ATTTATTGGC CGCCGCGCAG GAAGCCGATG TTGATTTTAC CATGGCGGAT 
ATTGACCGTA TGTCGCGCTT GGTGCCGCAC CTTTGTAAGG TTGCGCCATC GACGCCTAAG 
TACCATATGG AAGACGTGCA CCGTGCGGGC GGCGTGATGG GGATTTTAGG CGAGCTAGAC 
AGAGCCGGAT TGCTGCATAC CGATGTGTTC CATGTGGCGG CCGATGAAGG TGGCAATTTG 
AAGTCTGTAT TGGCGAAATA CGATGTGATG CAGACGCAAG ATGAAAAAGT AAAACACTTC 
TTTATGGCGG GACCTGCGGG GATTCCGACC ACTAAAGCCT TTAGCCAAGA TTGTCGCTGG 
CCGTCATTGG ATAATGACAG ACAAGAAGGT TGTATCCGTA GCCGCGAGTT TGCCTTCAGC 
CAAGAGGGCG GTCTTGCCGT ATTGTCGGGT AATGTGGCCG AGAACGGCTG TATCGTTAAA 
ACGGCGGGTG TGGATGAATC GAACCTGACC TTCGTTGGTT CGGCGCGCGT CTATGAAAGC 
CAAGATGACG CAGTGGCGGG CATTTTAGGC GGCGAAGTGG TGGCGGGTGA TGTGGTAGTT 
ATTCGTTATG AAGGCCCGAA AGGCGGCCCG GGTATGCAAG AAATGTTGTA CCCAACCAGT 
TACTTAAAAT CTCGCGGGTT AGGCAAAGCC TGTGCTCTGA TCACCGACGG TCGTTTCTCC 
GGTGGCACTT CTGGTTTATC GATTGGCCAT GTCTCACCCG AAGCGGCCGC GGGTGGCACA 
ATCGCCTTGA TTGAAAATGG CGATCGCATC GAAATCGATA TCCCCAAGCG CAGCATCAAG 
CTGGCGATAA GCGATGCTGA ACTCAATGCT CGCCGCGAGG CCATGTTAGC GCGTGGCCCA 
ATGGCGTGGA AACCTATAGG TCGCGAGCGT TATGTATCAC TCGCGCTTAA GGCCTACGCC 
ATGCTCGCCA CCAGTGCCGA CAAGGGCGCG GTGCGCGATC GCAGTAAACT GGAGGACTAA 

 

Protein sequence

MPKLRSATST EGRNMAGARA LWRATGVKDN DFGKPIIAIA NSFTQFVPGH VHLKDMGSLV 
ASAIEEAGGI AKEFNTIAVD DGIAMGHGGM LYSLPSRELI ADSVEYMVNA HCADALVCIS 
NCDKITPGML MAALRLNIPV VFVSGGPMEA GKTKLSDKLI KLDLVDAMVA GADSNVSDED 
SAKIERSACP TCGSCSGMFT ANSMNCLTEA LGLSLPGNGS MLATHADRRE LFLEAGRRVM 
VLAKRYYHQD DESALPRNIA NFKAFENAMT LDIAMGGSSN TVLHLLAAAQ EADVDFTMAD 
IDRMSRLVPH LCKVAPSTPK YHMEDVHRAG GVMGILGELD RAGLLHTDVF HVAADEGGNL 
KSVLAKYDVM QTQDEKVKHF FMAGPAGIPT TKAFSQDCRW PSLDNDRQEG CIRSREFAFS 
QEGGLAVLSG NVAENGCIVK TAGVDESNLT FVGSARVYES QDDAVAGILG GEVVAGDVVV 
IRYEGPKGGP GMQEMLYPTS YLKSRGLGKA CALITDGRFS GGTSGLSIGH VSPEAAAGGT 
IALIENGDRI EIDIPKRSIK LAISDAELNA RREAMLARGP MAWKPIGRER YVSLALKAYA 
MLATSADKGA VRDRSKLED