| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3604 |
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| Symbol | |
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| ID | 5078894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 4199066 |
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| End bp | 4200475 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640500810 |
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| Product | nitrite reductase (cytochrome; ammonia-forming) |
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| Protein accession | YP_001185111 |
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| Protein GI | 146294687 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3303] Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.357303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGCCC AGGTTAATAT TGATGTTCTG ACAAAAGGAT ACAAAGTGAA AATTTATTTA
AAAACAGTCA TATTACTCAA GCTGATTGGC TTTCTCGTTA TTGCTACATG CACATCTGTA
GCGGCTTCTG ATACCAGCAA TCAACAAAAA TATCCTAATC AATATCAATC TTGGCAAGCC
ACATCTGAAC AAGTTGAGCG CGAGGATATG CTCGCAAATT ATCCTGCCAG TATCATACTC
TGGGCAGGAT CTTCCTATGC AAAAGAGTAC CATAGCCCAC GGGGACACCA TTTCGCCGTT
GCCGATGTGA CACAGACTTT ACGTACAGGA GTGCCCCCTA AAGCAGGAGA GAAGGGCTTA
TCCGCCAGTT GCTGGACCTG TAAAACACCT GATGCACCCA GATTGATAGA ACAATTGGGA
TTTGAAGGGT ACTCAGCCAA AAACTTTACC GATTTGGGCA AAGAGATCCA AAGTGTCGTC
TATTGCAGCG ATTGCCATGA GTCTGGTACA CAGAAATTAG CCTTACCTCG CCCACATGCT
CAAGATGCAA TGGCCAAAGT TCACTTGCCA TTCGATAAAC AAGATAAAAA TATGCAAGGC
GCACAGGTGT GCGGTCAGTG TCATGTGACT TATTATTTCC GTCCAGAAAA AAGTAATGTC
GTTAATATTC CTTGGATTTT TGGTAGTACC GCTGATGATA TTGAAAAATA TTACGACACT
CGCCGCTTTT TTGAATGGAT CCACCCCATT TCAAAAACGC CCATACTCAA AGCACGTCAT
CCTGAGTTTG AGCACTGGAG TCGTAGTAAA CACGCCGAAG TCGGTGTCAC TTGCATTACT
TGCCATATGC CAACCCAGCA GGATGCAAAA GGTGTTGAAT TTACGAGCCA TAAAGTTGAT
AAAGCCTTAC CGCATTTTGA TAGTAGCTGC AGCGGCTGCC ATAGCAGTAA AACCAAAATC
GAAACTAAAC TCGCGGCGAA TAAGTTAACC ATTGAAACCA AAGCCCGCGA AGTGGAATCT
TTACTCGTCA AGGCTCACTA CGAAGCCAAA GCAGCATGGG ATGCAGGCGC TAAATGGGAA
CAAATGAATG AACCCATAAT GGCGATACGG CACAGTCAAT GGCGCTGGGA TTTTGCCATG
TCTTCACATG GCCTCTATGC CCATAATCCA GAGGAAGGTA AGCAGCTATT GGATAAAGCG
ATTGAACAAG CCAACGATGC ACGTAATCAA CTCGCGAGTG TTTTAAAACA CTTCAAAGTG
ACACAAGTCA GCTATCCAGA TATCAGCACC AAAGAGAAAG CTCAACAAGC AATTGGATTG
GTTGAAGCTG ATTTAATTAA AGAAAAACAA AAATTTATTG AAGATGAAGT CAATAAAAAC
TGGCATCCTG TTGCCAAATA CGGTTATTAA
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| Protein sequence | MGAQVNIDVL TKGYKVKIYL KTVILLKLIG FLVIATCTSV AASDTSNQQK YPNQYQSWQA
TSEQVEREDM LANYPASIIL WAGSSYAKEY HSPRGHHFAV ADVTQTLRTG VPPKAGEKGL
SASCWTCKTP DAPRLIEQLG FEGYSAKNFT DLGKEIQSVV YCSDCHESGT QKLALPRPHA
QDAMAKVHLP FDKQDKNMQG AQVCGQCHVT YYFRPEKSNV VNIPWIFGST ADDIEKYYDT
RRFFEWIHPI SKTPILKARH PEFEHWSRSK HAEVGVTCIT CHMPTQQDAK GVEFTSHKVD
KALPHFDSSC SGCHSSKTKI ETKLAANKLT IETKAREVES LLVKAHYEAK AAWDAGAKWE
QMNEPIMAIR HSQWRWDFAM SSHGLYAHNP EEGKQLLDKA IEQANDARNQ LASVLKHFKV
TQVSYPDIST KEKAQQAIGL VEADLIKEKQ KFIEDEVNKN WHPVAKYGY
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