Gene Sputcn32_3597 details

Gene Information

• Locus tag: Sputcn32_3597
• ID: 5078833
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 4188790
• End bp: 4190709
• Gene Length: 1920 bp
• Protein Length: 639 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640500799
• Product: diguanylate cyclase/phosphodiesterase
• Protein accession: YP_001185104
• Protein GI: 146294680
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2200] FOG: EAL domain
• TIGRFAM ID: [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACTGT TTAGACAGAT TTATTCGCTG CTGTTTAGCC TCTTTTTGTT AGTAGTCGCA 
AGCTTAGGTT ATGTGCAATT TACTGAGACC CAAAGCTTTT TAACTAAGCA AATGGAGTCC 
GATCTAAACA ACGTCAGCAA CTCTCTCGGC TTAATGCTCA CCCCTGCACT CGAGGCTGGT 
GATACAGTCG CGGCAGAAAC GTTAGTCAAT GTTATTTTTG AAGGTGGTTA CTACCAAAAA 
GTGAAATTGA CATGGATGGT AGATGGCAAA CAACAGGAAT GGACAAATCC ACTAAAAATT 
GAAGGCGTCC CTCAGTGGTT TATCAATCTC AATCTCTTTA AGACTATACG CAAAGAAAGC 
ACGATCACAT CAGGCTGGTT ACAACTTGCA CAACTTGAAA TTACCGCTCA TCCTGGGTTT 
GGTTATCATG AGTTGTGGCG GATCATGTCA AATACCATCA TCGCTTTCTC CCTATTGTTT 
TTGGTTGCCA TAATTACCGC AAGATTAGGA CTCACTTGGA TCCTAAAGCC CCTACATGCA 
CTATCAGAAC ACGCTAAGCG TATCGCAGCT CGCCAATTTG GCCCAGATAT GCCATTGCCT 
AGAACCACTG AACTGAAGGA TCTTGTAACC GCCTTTAACA GTATGTCGAC GCAACTAAAG 
CAAGTATTCC AATCTTTAGA TGAAGAAGTC GGCGCACTTC GTAAGAAAAA TCTTATGGAT 
CCAGCATCAG GCTTACCCAA TAGGCAATAT GTGGTAAACC GACTCAACGG CTGGTTAAGT 
GAGCCTAGCA GTGGCGCACT CTTCCTAGCA AAACTAGATT GGCTTGAAGA AGTACATAGC 
AAATATGGTT ATCAAGTAAG AGATGAAACC ATACGTATTC TCGCGGAGAG ATTTCAGAAG 
GAATTGAATG AAATTACCCC TTCGGTTATC GCACGCATTG CGGCTTTTGA ATTTGCGTTT 
TTAGTCACAG ATGTTGAGCA CGATCAAATC AGCAAATATC TGCAAACATT GATCCGTACA 
ATTAACCAAG AAATGTCCAA AGCGGGCTGT AAACCTAATG AAAACTTTGC AATAGGCGTT 
GCTGAGCGAA TAGGGCAAAT GAAAGTGTCG GATATTTTGG CACAAGCGGA TAACGCATTA 
CAAAAAGCAC TCAAAGAAAA TAAAACCTTC CACTGGTTTG AAACGACTGA ACAACAGCTT 
TTTACCCGTG AACAATGGCG AGATAATCTC AGTCATGCTA TCAGTAATAA AAAGTTTAAG 
TTTAGATGGC AACCTATTCA ATTCTGTAAT GGAGATGGTA TTGCACAACG GGAATTATAT 
TGCCAATTAG AACTTGGCGA TAAATTAGCA CATGCAGGGC AATTTATGCC TTACATTGAA 
TTATTATCGC TTGGTGCGCT ACTCGATAAG TGTTTAATTG AAACTGTATA TGAACAAAAA 
CTCCTCGAGC GTAGCTATGA GCCAGTGGCA ATTAACTTAA CACACCAAAG TATTAGCGAT 
CCCCAATTTC ATGAGTGGCT TAATCATTTC CTTCGCAATG CCCAACATGT TGAACGCATT 
TGCTTTGAAA TACCAGAAGC TGGTGTATAT AGCGATTTAG CGTCATGTTT ACACTTGTGT 
GAAATTATTC GCGATAATGG TGCTAAATTT GGTATTGACC ACTTTGGACG TCAATTTGGC 
TCTATGTCCT ATTTGCAAGA GCTTAGACCG AGTTACGTTA AGCTCGATCA GTCTTTCTCT 
TATTACGATG AAGCACAGCA TAACAGTGAG CTTTGCCGCG CTATTATTAA TGTCGCTAAA 
GGATTAGATA TTCAAGTGAT AGTGACTGGC ATTCAAGAAA AAGCACAACT TGAACGCTTT 
AATGAACTAA GAACGGATGC CTATCAAGGA TTTATTGCGC CACCAGAAAA TCTAGAATAA 

 

Protein sequence

MTLFRQIYSL LFSLFLLVVA SLGYVQFTET QSFLTKQMES DLNNVSNSLG LMLTPALEAG 
DTVAAETLVN VIFEGGYYQK VKLTWMVDGK QQEWTNPLKI EGVPQWFINL NLFKTIRKES 
TITSGWLQLA QLEITAHPGF GYHELWRIMS NTIIAFSLLF LVAIITARLG LTWILKPLHA 
LSEHAKRIAA RQFGPDMPLP RTTELKDLVT AFNSMSTQLK QVFQSLDEEV GALRKKNLMD 
PASGLPNRQY VVNRLNGWLS EPSSGALFLA KLDWLEEVHS KYGYQVRDET IRILAERFQK 
ELNEITPSVI ARIAAFEFAF LVTDVEHDQI SKYLQTLIRT INQEMSKAGC KPNENFAIGV 
AERIGQMKVS DILAQADNAL QKALKENKTF HWFETTEQQL FTREQWRDNL SHAISNKKFK 
FRWQPIQFCN GDGIAQRELY CQLELGDKLA HAGQFMPYIE LLSLGALLDK CLIETVYEQK 
LLERSYEPVA INLTHQSISD PQFHEWLNHF LRNAQHVERI CFEIPEAGVY SDLASCLHLC 
EIIRDNGAKF GIDHFGRQFG SMSYLQELRP SYVKLDQSFS YYDEAQHNSE LCRAIINVAK 
GLDIQVIVTG IQEKAQLERF NELRTDAYQG FIAPPENLE