| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3594 |
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| Symbol | |
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| ID | 5078830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 4186034 |
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| End bp | 4187449 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640500796 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_001185101 |
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| Protein GI | 146294677 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACTT TAGTAAAACG ACCATTTCAA TGTTCAAAAA TAGCCATGGT ATTGTCATTA
ATACTATTAC CATTATCGGC TCAAAGTCAG ACTTTAGAGC AGGCGGTTGC GCACACGATC
GATACCAATC CAGATCTGCG CGTCGCCTTT AATCGCTTTA AAGCGCGGGA AGAGCAAGTT
AACCAAGCAA TGGCTGGTTA TATGCCAACC ATTGATATCA CTGGCGGTTA TGGTTATGAG
CAAACCGACA GTGTATCAAC TCGCAGACGT AAAAATGTGG GTGATGTTGA TAGTAAAGGA
GTGGCAGAGC TAAACCGTGG AGAATTCGGT GTTAGCTTAA AACAAATGCT ATTCGATGGC
TTTTATACCA GCAGCGAAGT CAATCGCTAT AGCTTTGAAG CCAGTGCAGA TCAGTGGGCC
TTACTCGCCG CGGCAGAAGA TATGGCACTA GAGGTCAGTA AAGTCTACCT CAACTATCTG
CGTACTCTTG AAGTCCTAAA ACTGGCAGAA AAAAATCTCG ATAGCCATAA AGAGATTTAT
GACCAAATTA AACAACGCAC CGATTCTGGT TTAGGTTCAA CCGCTGACTT ATCCCAAATA
TCTGGCCGTC TTGCTCGTGC AAATGCCAAT GTAATGTCAG CGCGCAATAA TTTACTTGAT
GCGAAAGCAC AATACGTCAA AGTCGTTGAA TCTGAACCAG TTGATTTAAT TCAGCCCGTA
CCAGATGCTG ACATGTTACC AAAAGATCTT AGCTCAAGTT TAAATGATGC CCAGCAGAAT
CATCCTATTT TAAAATCCGC GGCTAATGAT ATTCGTGCGG CTGAAAATGA GCGCTCATCC
GTTCAATCCA ATTATTATCC ACAGGTTTCA TTAGAGCTCA GTGGTAATTG GAATAATGAT
ATTGGCGGTG AAGATGGCGT AAGTAATCTG GCGAGCCAAA ATGTGGGCGG ACATAACAAC
GATCTCCTTG CTATGGTTCG AGTGAAATAC AACCTTTTCG CTGGAGGAAG AGATCTTGCT
CGGGAAAAAG AAACTGCCTA TAAGCTCGGT GAAGCAAAAG AAATTCGCCA ACGTGCACAA
CGAGAAGTGG TTGAAGGCGT GAATCTAGCT TGGAACGCCT ATGAAATGTT AGCACCACAG
AAAGAATATA TTCGCGATCA CGTCGTTGCA GCAAAAGATA CTCAATCTGC CTATGCGCAA
CAATTCAACC TCGGTCAGCG CAGCTTACTC GATTTACTCG ATACTGAGAA TGAACTATTT
GAGGCTCGTA AAGATTATTT ACAGACCGAA TATGATGAAA TCATCGCAAA ATATCGTGTA
CTCAACGCTA CTGGTCGTTT ATTAGACTCA CTCAAAGTTA CTCGCCCTGA AGCATGGCGT
GGCGAACGTA ACTATGAAGG AGGAACTAAC AAATGA
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| Protein sequence | MNTLVKRPFQ CSKIAMVLSL ILLPLSAQSQ TLEQAVAHTI DTNPDLRVAF NRFKAREEQV
NQAMAGYMPT IDITGGYGYE QTDSVSTRRR KNVGDVDSKG VAELNRGEFG VSLKQMLFDG
FYTSSEVNRY SFEASADQWA LLAAAEDMAL EVSKVYLNYL RTLEVLKLAE KNLDSHKEIY
DQIKQRTDSG LGSTADLSQI SGRLARANAN VMSARNNLLD AKAQYVKVVE SEPVDLIQPV
PDADMLPKDL SSSLNDAQQN HPILKSAAND IRAAENERSS VQSNYYPQVS LELSGNWNND
IGGEDGVSNL ASQNVGGHNN DLLAMVRVKY NLFAGGRDLA REKETAYKLG EAKEIRQRAQ
REVVEGVNLA WNAYEMLAPQ KEYIRDHVVA AKDTQSAYAQ QFNLGQRSLL DLLDTENELF
EARKDYLQTE YDEIIAKYRV LNATGRLLDS LKVTRPEAWR GERNYEGGTN K
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