Gene Sputcn32_3580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3580 
Symbol 
ID5078816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp4158092 
End bp4159000 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content45% 
IMG OID640500782 
Producttyrosine recombinase XerC 
Protein accessionYP_001185087 
Protein GI146294663 
COG category[L] Replication, recombination and repair 
COG ID[COG4973] Site-specific recombinase XerC 
TIGRFAM ID[TIGR02224] tyrosine recombinase XerC 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.636062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGATA TGTCGGACCT CGAAGTGACA TGCCTGCAGG ACTATGAGCG TTATTTACAT 
TCAGAGCGGC AGTTGTCGGC TCACACTGTG CATAACTATC TCTATGAACT AAATCGTGTT
AGTACGCTAT TACCTAAAGA CGTTACCTTA CTTAATGTGG GTCGAGAGCA TTGGCAACAA
GTGCTCGCAA AATTACACCG CAAAGGCTTG AGCCCTCGCT CGCTTTCCTT GTGTTTATCT
GCGATCAAAC AGTGGGGTGA GTTTTTACTG CGGGAAGGGA TGATAGCGGT TAATCCAGCC
AAAGGACTCA GTGCACCTAA ACAAGCCAAG CCACTGCCTA AAAATATGGA TGTCGATTCC
CTTACTCATT TACTTGAAAT TGAAGGTACA GATCCCTTAA CGCTGCGAGA TAAAGCCATG
ATGGAATTGT TTTATTCCAG CGGATTACGT CTTGCCGAGT TAGCAGCACT CAATTTATCA
AGTGTACAGT ACGATCTGCG TGAAGTTAGA GTATTAGGTA AAGGCAATAA AGAGCGTATT
GTGCCAGTAG GCAGTTATGC CATTAAGGCA TTAGAGGCAT GGCTTGTATG TCGTCAGCAA
ATTCCTTGCG AAGATTGTGC ATTGTTTGTA ACGGGAAAAG GTAGACGATT ATCTCATCGG
AGTATCCAGT CGCGGATGGC AAAGTGGGGG CAGGAACAAG CGTTATCAGT GCGAGTCCAT
CCCCATAAAT TACGTCATTC TTTTGCGACT CATATGTTGG AGTCGAGTGC CGATCTGCGT
GCAGTGCAGG AATTATTAGG CCACGCAAAC CTCTCAACGA CACAAATTTA TACCAGTCTA
GATTTCCAAC ATCTTGCGAA GGTGTATGAT AGCGCCCATC CTAGAGCGAA AAAACAGCAG
GATAAATAA
 
Protein sequence
MGDMSDLEVT CLQDYERYLH SERQLSAHTV HNYLYELNRV STLLPKDVTL LNVGREHWQQ 
VLAKLHRKGL SPRSLSLCLS AIKQWGEFLL REGMIAVNPA KGLSAPKQAK PLPKNMDVDS
LTHLLEIEGT DPLTLRDKAM MELFYSSGLR LAELAALNLS SVQYDLREVR VLGKGNKERI
VPVGSYAIKA LEAWLVCRQQ IPCEDCALFV TGKGRRLSHR SIQSRMAKWG QEQALSVRVH
PHKLRHSFAT HMLESSADLR AVQELLGHAN LSTTQIYTSL DFQHLAKVYD SAHPRAKKQQ
DK