| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3561 |
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| Symbol | |
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| ID | 5078797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4140354 |
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| End bp | 4141112 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640500764 |
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| Product | general secretion pathway protein J |
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| Protein accession | YP_001185069 |
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| Protein GI | 146294645 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTTAA AACTAACTAA AGCTCACACA GGCTTTACGT TGCTTGAAAT GTTAATCGCT
ATTGCGATTT TTGCCATGAT AGGTGTAGCG GCCAATGCTG TGTTAAGTAC GGTATTGACC
AACGATGAAG TGACTAAAAA CTTTTCGACT CGCCTAAAGG CATTGCAGCA AGGCTTTGGT
GCGATTGAGC GTGATTTAAA CCAAATGGTC GCGAGAACAC CAAGGTTACT CGAGGGTGGA
CGTGGTACTA CGGTATTCCA AACGGGTAAT GAGCTTTTAG ACTCAGAATC TGAGGCACTC
GTCTTTTACC GTTTGGGTTG GTTAAATCCC GATGGCTTAT TGCCAAGAGG CAGTTTGCAG
TCCGTCGCTT ATGTGGTGCA AGAAGGACGA TTGGAACGCT GGTATTTTCC CTACCCAGAG
CCTGAGTTTG GTGCTGAGCC GATTAAGACT GTGATCATCG ATAACGTGTT GTCGATAGAA
TATTCCTTCT TTATGGAAGA TAAATGGGAG CGAAAAGTCG AAGCGACTAA GCTGCCTAAA
GCCATCGCGA TGGAAGTGGA TATTGAAGGT TTAGGTAAAA TTCAGCGTAA GTTCTTGTTG
CCATTAGGGG CCTTAGCACC TGAAAAATCT AAGGACGATG ACAACAAAGA TAAGGATGAT
CCAAAAGACG ACAATAAAGA GAATGAAGAT ACTGGTAGCG GTGATGGCTC TGGCGAAGTG
GATCCTAATG ACGATCCCGA AGACGAGGGT CGAGAATGA
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| Protein sequence | MSLKLTKAHT GFTLLEMLIA IAIFAMIGVA ANAVLSTVLT NDEVTKNFST RLKALQQGFG
AIERDLNQMV ARTPRLLEGG RGTTVFQTGN ELLDSESEAL VFYRLGWLNP DGLLPRGSLQ
SVAYVVQEGR LERWYFPYPE PEFGAEPIKT VIIDNVLSIE YSFFMEDKWE RKVEATKLPK
AIAMEVDIEG LGKIQRKFLL PLGALAPEKS KDDDNKDKDD PKDDNKENED TGSGDGSGEV
DPNDDPEDEG RE
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