Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3534 |
Symbol | |
ID | 5078727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4107695 |
End bp | 4108939 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640500737 |
Product | hypothetical protein |
Protein accession | YP_001185042 |
Protein GI | 146294618 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA CAATTATTGC GTTGTCATTG TTAGCGGTAA ATGGGGCGAT GGCCGCCGAC TTACCTGACT TCTTAGATCA GAGTGAAATT GATAATGCAC AATTTAAGTG TCTTGGTGAG CCAGTAACCT ATTCAAAGAC CGATCAGAAG TATGTCAATA TGCTTTGGAA TGAGACGCTA ACTTATCTAA AAGCTTATGC CATAGCTTTA ACTAACGGCG AAAACAGTCA TTATCTGAAT TCAGATGTGG CCATGATCGA CTCGACCCGA GGTGGTCAAA AGATGTGCAT TATGGATCGC CGCGATATGC AGCTGATGGT GAAAAACATC TATCAGGTGA TCAACAACGC CGACAAGGCC AAGCAATGTT TTGGTGTCCG TGAAGATGTT AATTGGATCT ATAACCCCGG TGGCGAATTA ACCAAGAACT CACCTGTTGC GCAACACTTT AAGCGTACAA CTTTTGATGA ATTCTTTATG ACGAAGGTGA CCAATAAAGA GGTGCAAAAA TTAGGTAAAA CCTTCACTAA TAATTTCTAT AAGATGGTTA CTGGTGATGA AGTGAAGATG CCTTCGGTAT TCCCTTATGA CATCAGCGCT AACGCTCTGC CCAATCTGTG GGCAGCAGCA GGCTGGTTTC CTATGTATGC CGAGGAGAGT AAGCGTAATG ACAAGAACTT CAACAACATT CGCGGTGGCT ACGCCTACGC TGAGGTCTTC GGTCATTGGG GACTGCTGCG TATAGATGAG ATCAATGGCG AAAAGGTTGG TGCCGAAGTT GGTATGACAG TACAGTCAGT CGATACGCTT TACCCCTATC ATAATCACGC TATCTCAGAG ATGTACTACA ACATGCGCGT GCCAGCATGT ACGAATCAGT TTAAGAGTTT TGCAGTTCGT GCCGACTCAC CTCTAGTAAA AACAGTCAAG CAAGATGCCA CGATGCGTAG AGTACAGTTT GATGCTGCAC AGCATAATGG CCACACCATG TGGTTAGCTG GAAGTTACGA CCAAGACCCC CTGATGTATT TCCACGAAAA CACAATACAC GCATTCGATA TTGATGGTAG CTGTGAAGCT AAGCCAGAAG AGAGAGCCAT AGTTTCTGTC TGGGCAAGAA GTAATGCCCA TGACAAGCGT AATGATTATG GAACCACACT GCTTTGTGAA TCAGCACAAA ATCCTGGTAC GCCAGCCAAT AAAGATGAAG TCATTCAGTG CGATTTGACT CATTTGAAGT GGTAA
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Protein sequence | MKKTIIALSL LAVNGAMAAD LPDFLDQSEI DNAQFKCLGE PVTYSKTDQK YVNMLWNETL TYLKAYAIAL TNGENSHYLN SDVAMIDSTR GGQKMCIMDR RDMQLMVKNI YQVINNADKA KQCFGVREDV NWIYNPGGEL TKNSPVAQHF KRTTFDEFFM TKVTNKEVQK LGKTFTNNFY KMVTGDEVKM PSVFPYDISA NALPNLWAAA GWFPMYAEES KRNDKNFNNI RGGYAYAEVF GHWGLLRIDE INGEKVGAEV GMTVQSVDTL YPYHNHAISE MYYNMRVPAC TNQFKSFAVR ADSPLVKTVK QDATMRRVQF DAAQHNGHTM WLAGSYDQDP LMYFHENTIH AFDIDGSCEA KPEERAIVSV WARSNAHDKR NDYGTTLLCE SAQNPGTPAN KDEVIQCDLT HLKW
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