Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3510 |
Symbol | |
ID | 5078703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 4082595 |
End bp | 4083695 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640500713 |
Product | tRNA (uracil-5-)-methyltransferase |
Protein accession | YP_001185018 |
Protein GI | 146294594 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
TIGRFAM ID | [TIGR02143] tRNA (uracil-5-)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.1665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTTAG CAGCAATGGA CCCTCAGACT TATGATGCGC AGTTAGAACA CAAGCGTATC AAGCTAGAAC AAGCCTTTGC CCAATTTGAA ACACCGAGTG TTGAAGTTTT TGCCTCAGAG CCAGCTAACT ACCGTATGCG CGCGGAATTC CGCATGTGGC ATGATGGTGA CGACTTATAC TATTACATGT TCGATAAAGT ATTGAATGAG AAAGTACGTT GCGATCAATA CTTACCAGCT AGCGTGCTCA TCAATCAAAT GATGTCGGCC TTAATCGCCG AGCTGAAACC GAATCCGAGT CTAAGGCACA AACTGTTCCA AGTGGATTTT TTGTCGACTT TAAGCGGCGA GATCTTAGTG TCTTTGCTTT ATCACAGGCA GCTTGATGAC CAATGGCGCA CCAATGCGGC TGCACTGAAA GCCAAGTTAA GTAGCCAGTT TAACGTCAAC ATCATCGGCC GTGCCCGTAA GCAAAAAATC GATTTAGATA AAGACTTTGT GGTTGAGTCA TTACAAGTCA ATGATAAAAC CTTCTTATAT AAGCAGATAG AGAATAGCTT TACCCAACCG AACGCTAAAG TAGCAGTCAA AATGTTGGAG TGGGCAATCG ATGTCACTCA AGATAGCCAA GGCGATTTGC TTGAGCTTTA CTGTGGCAAT GGTAACTTTT CAATTGCATT GGCCCAAAAC TTTAATCGCG TACTTGCGAC TGAACTTGCG AAACCCTCGG TAGAGGCCGC GCAATACAAT ATTGAGGCTA ATGGCATTAA AAATCTGCAG ATTATCCGTA TGTCGGCTGA AGACTTTAGT GATGCTATGG CAAAAAAACG CAGTTTTAGG CGTTTAGAAG GGATCGATCT TGATAGCTAT GTTTGTAATA CTATTTTTGT CGACCCACCA CGCGCTGGAA TCGATCCTGA TACTTTGGCT TTAGTGCAAG GTTACGAGCG GATTTTATAT ATTTCCTGTA ATCCTGACAC CTTAAAAGAC AATCTGGAAC AACTGTACAA AACCCATAGA GTCACACAAT TTGCCCTATT TGATCAGTTC CCCTACACCG ATCACATGGA AACAGGTGTA CTGCTAGAGC GTACTCAATA A
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Protein sequence | MNLAAMDPQT YDAQLEHKRI KLEQAFAQFE TPSVEVFASE PANYRMRAEF RMWHDGDDLY YYMFDKVLNE KVRCDQYLPA SVLINQMMSA LIAELKPNPS LRHKLFQVDF LSTLSGEILV SLLYHRQLDD QWRTNAAALK AKLSSQFNVN IIGRARKQKI DLDKDFVVES LQVNDKTFLY KQIENSFTQP NAKVAVKMLE WAIDVTQDSQ GDLLELYCGN GNFSIALAQN FNRVLATELA KPSVEAAQYN IEANGIKNLQ IIRMSAEDFS DAMAKKRSFR RLEGIDLDSY VCNTIFVDPP RAGIDPDTLA LVQGYERILY ISCNPDTLKD NLEQLYKTHR VTQFALFDQF PYTDHMETGV LLERTQ
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