| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3500 |
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| Symbol | |
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| ID | 5080535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 4065569 |
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| End bp | 4066510 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640500698 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001185008 |
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| Protein GI | 146294584 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0910886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAAAC GTTTGGATCT GAATTTACTG CCCGTACTCG AAATCCTACT TGAGGAACAA
AGCGTGACCG CCGCTGCGGC GCGGTTGCAT TTGAGCCAGT CGGCGGTGAG TAAACAGCTC
ACACGTTTGA GAGAAGTGTT TGACGATCCT TTATTTGAGC GTACCGCCTA TGGCCTAAAA
CCGACGCCCA AGGCCTTGTC ACTCGCGCCT GAGTTGCGCC AATGCTTACA GCAGCTGGCG
CAATTTACTC GCCCCAACAC CTTTGAACCG GTCTTGAGCC AACGTCAATT TAGAATGCAT
TTGGTTGAAA CCACCTATTC GCTGACCTTT CCCCATTTTA TGCCCACGTT GCTTACCCAA
GCGCCCGGTG TGAGTCTCAA TTGTCAAACA TGGCGACTCG ATACTATGGA CAAATTACTG
CGCTGCGACA TCGACTTAGC CATAGGTTGT CGCGAGTGGG ACGAGCGCTC GCCCATGCAT
GTGAATAATA TTCCCGATGA CTTATGTCAT GCTGAGTTAG TGCAGGATTA TCCAGTGTGT
TTGATGCGCC GTGATCATCC GGCGTTAACG CAAGAGTGGA ATTTAGATAC CTTCTTGAGT
TATCGTCATC TGCAAGTGGC TTTTGGTGGT TTAGAGCATT GGTTGCTGGA TGATGTGTTG
CAACTCGAGG GCCGTAAACG GGATATTGCC GTGAATATGA CCGACTTTCA GAGTGCTCTC
ACCCTGTGTG AACAGAGCGA TTTGATCCTC TGTGCACCTT CGCGGTATGC CTTGGCTGTG
ATGAAGTCTT TTGAGCTTCA GTCTTTACCA TCACCCATCA AGCTGATCCC CGGTGCGTAT
TTATTGATGT GGCACAAACA CTTCGAACAC GACTTAAGCC ATAAATGGCT GCGAGAGTTG
ATTATCAATC GAGTGCATCA ATCACACTCG CCTCAAACTT AG
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| Protein sequence | MLKRLDLNLL PVLEILLEEQ SVTAAAARLH LSQSAVSKQL TRLREVFDDP LFERTAYGLK
PTPKALSLAP ELRQCLQQLA QFTRPNTFEP VLSQRQFRMH LVETTYSLTF PHFMPTLLTQ
APGVSLNCQT WRLDTMDKLL RCDIDLAIGC REWDERSPMH VNNIPDDLCH AELVQDYPVC
LMRRDHPALT QEWNLDTFLS YRHLQVAFGG LEHWLLDDVL QLEGRKRDIA VNMTDFQSAL
TLCEQSDLIL CAPSRYALAV MKSFELQSLP SPIKLIPGAY LLMWHKHFEH DLSHKWLREL
IINRVHQSHS PQT
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