Gene Sputcn32_3466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3466 
Symbol 
ID5080501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp4033087 
End bp4033749 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content44% 
IMG OID640500665 
Productflagellar hook capping protein 
Protein accessionYP_001184975 
Protein GI146294551 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTGG CTAGCGCAAC AAATAACCCA GTCCAGAATC CTGCTGGCGC ATTGGCGGCA 
CCGGGGAATG ATGCAGCATC ATTAAAAAAT GAGTTTATGA CATTAATGAT TGCGCAGATT 
AAAAACCAAG ACCCGACTAA ACCGCTTAAC AGTGCTGAAT ATATCTCTCA GCTAGCGCAG 
TTTTCGCAGG TCGAAAGTTT AGAAGGGATG CGGAAGAATC AATCCAACCA AATGATCATG 
ATGGAAAATT TAGGCATTGT GCAATCGGCG TCTTTGATCG GCAAGAATGC CATGGTGCCT 
GTGTCTGAAT TTAAGCTCGA TGGTGAAACG GTTGAGGGAA AAGTGTATTT GGAGAATGCG 
GTTGAAGCAC TCGATATCGA GATTGTGAAT TCCGAAGGAC AAGTTGTCCA CACTATGCAA 
TTAGGTGCGC AAGCAGTCGG TGATATTCGT TTTGCTATCG ATCCAGATGA GCTGGGATTA 
GAAAAAGGCC AATATGAAAT CAAAGCGAAG GCGACACTGG GTGAAAATAG TTTAGTCGCG 
CCTACGTATA TAAAAGCACC GATAGAGCGA ATCCATTTTT CCAGTGCATC GGGCATGATG 
ATGGCTGAAA TGGGCCATGG TGTCGGTGTG ATTTCAGTTC TCAATATTTC TGAAGTTTCG 
TAA
 
Protein sequence
MEVASATNNP VQNPAGALAA PGNDAASLKN EFMTLMIAQI KNQDPTKPLN SAEYISQLAQ 
FSQVESLEGM RKNQSNQMIM MENLGIVQSA SLIGKNAMVP VSEFKLDGET VEGKVYLENA 
VEALDIEIVN SEGQVVHTMQ LGAQAVGDIR FAIDPDELGL EKGQYEIKAK ATLGENSLVA 
PTYIKAPIER IHFSSASGMM MAEMGHGVGV ISVLNISEVS