Gene Sputcn32_3459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3459 
Symbol 
ID5079850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp4026748 
End bp4028121 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content46% 
IMG OID640500658 
Productflagellar hook-associated protein FlgK 
Protein accessionYP_001184968 
Protein GI146294544 
COG category[N] Cell motility 
COG ID[COG1256] Flagellar hook-associated protein 
TIGRFAM ID[TIGR02492] flagellar hook-associated protein FlgK 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATGT TGAATATTGG TAAGTCTGGC TTACTGGCAA GTATGGCGGC ATTGAATGCG 
ACGTCAAATA ACGTCGCTAA TGCTATGGTT GCAGGTTATT CACGTCAGCA AGTCATGCTA
AGTTCAGTTG GTGGCGGCGC ATATGGCTCT GGCGCGGGTG TGTTTGTGGA TGGTGTTCGG
CGGATCTCAG ATCAGTACGA GGTCGCCCAA TTGTGGCAAA CCACGAGTGC CGTTGGCTTT
TCTAAAGTGC AAAGCAGCTA TTTGCGTCAG GCTGAACAAG TATTTGGTGC AGATGGAAAT
AATATTTCAA AAGGTCTTGA CCAATTATTT GCAGCATTAA ACTCCTCTAT GGAGCAGCCT
AATTTAATCG CTTACCGACA AAGTGTGCTC AATGAGGCTA AGGCCGTCGC TCAAAGAGTG
AATGCGATTA ACGATAATAT TGACTCGCAG CGTAATCAGA TCAATGGGCA ACTGGGGACA
TCGGTCAAAG AGATAAACGC ACAACTTGCG ATTATTGCTA ATTTCAATCG AGATATTCAG
GCTGCCAGTG TGACAGGTAC AATTCCACCT GCACTGCAGG ATGGCCGCGA TGCGGCGATT
GATGACTTAG CCGCTATTAT CGATATTCGT GTCGTTGAAG ATAGCCAAGG TATGCTCAAT
ATCTCGCTGG CCCGAGGTGA GCCGTTATTG ACTGGAAATA CCGCGGCTAA ACTGACCAGC
GCACCTGATC CTGCTAACCC TAAAAATAAT CTAGTATCGA TTCAATTTGG GGCGAGCCAG
TTTAACGTCG ATGAGACTGC GGGCGGCAGT TTAGGGGCAT TACTTAACTA TCGTGATACT
CAACTTGCTG ACTCTCAAGC CTATATTGAT GAATTAGCGG TGATGTTGGC AACCGAGTTC
AATTCAATTC TCGCTTCTGG TACTGATTTA AATGGTGCAA CACCATCACA GGATCTCTTT
ACGTATCAAG CCAATAATCC TGGTGGGAGT TTATCGCTAA CTGCTGGTTT TACACCTGAT
AAACTTGCCT TTGGTCAGGA TGGCACCCAA GGAGATAACA CAAACTTGAA AGCCTTAGTG
CAGTTGGCCA ATAAGGAACT GAGTTTTACT AGCCTTGGTA GTAGTACCAG CTTAGCGGAA
TCCTTTTCCA GCAAAGTCGG CCAATTGGGT TCTGCTTCTC GCCAGGCTAT TTCATTTGCC
AAAACCAGTG TGGATTTGCA AAAAGATGCA CAAGTCCAGT GGGCGAGTAC CAGCGGTGTT
AATCCCGATG AAGAAGGGAT TAATCTGATC ATTTATCAGC AGTCTTATAT GGCCAATGCC
AAGGTGATTT CCACTGCGGA TCAGCTGTTT CAAACTATGC TAAGTAGCTT TTAA
 
Protein sequence
MSMLNIGKSG LLASMAALNA TSNNVANAMV AGYSRQQVML SSVGGGAYGS GAGVFVDGVR 
RISDQYEVAQ LWQTTSAVGF SKVQSSYLRQ AEQVFGADGN NISKGLDQLF AALNSSMEQP
NLIAYRQSVL NEAKAVAQRV NAINDNIDSQ RNQINGQLGT SVKEINAQLA IIANFNRDIQ
AASVTGTIPP ALQDGRDAAI DDLAAIIDIR VVEDSQGMLN ISLARGEPLL TGNTAAKLTS
APDPANPKNN LVSIQFGASQ FNVDETAGGS LGALLNYRDT QLADSQAYID ELAVMLATEF
NSILASGTDL NGATPSQDLF TYQANNPGGS LSLTAGFTPD KLAFGQDGTQ GDNTNLKALV
QLANKELSFT SLGSSTSLAE SFSSKVGQLG SASRQAISFA KTSVDLQKDA QVQWASTSGV
NPDEEGINLI IYQQSYMANA KVISTADQLF QTMLSSF