Gene Sputcn32_3450 details

Gene Information

• Locus tag: Sputcn32_3450
• ID: 5079841
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: -
• Start bp: 4018809
• End bp: 4019276
• Gene Length: 468 bp
• Protein Length: 155 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 640500649
• Product: flagellar basal body-associated protein FliL
• Protein accession: YP_001184959
• Protein GI: 146294535
• COG category: [N] Cell motility
• COG ID: [COG1580] Flagellar basal body-associated protein

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.524005
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAATTG TAAAATCGCG TGTAATAAAA ATTACCCTAG CATTTTTTGT ACTCATTAGC 
TGGACTGCTG GGGCGTTATG GATTGGGATA AATGGTGCCG ATTGGAAGTT AACAGAGCTT 
TTTGCCTCTG AACCTGAAGT CGAACCTGTG CCTGTGGCAA AGTTTTACCC ATTAGAAAAG 
TTTGTGATAT CGATACCAGG GGATAAATAT CCCCATTACA TGCTGCTTGA AATGTCATTG 
AAAAGTTACA ATCCCGATAT GAAAACAGTG TTAGTTGAGG CCGATCCTCT CATTCGTAAC 
GCCATGATGA AAATGTTTTC ACGTAAAACA TTTGAACAGT TAAATCATTT GGATCAGCTC 
GATGGTTTGC AGGCTGAAGC CCTTATTTTG ATGGTGAAAG TGCTATCTGA TAACAAATTG 
CCATCAGATA TTGATGAAGT ACTTTTTACC CGTATGGTGA TCCAGTAA 

 

Protein sequence

MAIVKSRVIK ITLAFFVLIS WTAGALWIGI NGADWKLTEL FASEPEVEPV PVAKFYPLEK 
FVISIPGDKY PHYMLLEMSL KSYNPDMKTV LVEADPLIRN AMMKMFSRKT FEQLNHLDQL 
DGLQAEALIL MVKVLSDNKL PSDIDEVLFT RMVIQ