Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3431 |
Symbol | |
ID | 5079822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4001499 |
End bp | 4002425 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640500630 |
Product | Ppx/GppA phosphatase |
Protein accession | YP_001184940 |
Protein GI | 146294516 |
COG category | [F] Nucleotide transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0248] Exopolyphosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAACAC CCGCTTATGC CGCAATTACG TTAGGCTCTA ATAGCTTTAA TATGCTGATC GCTAAGACAA AAGGCGGTCA GCCACATATT ATTGCAAAAT ATAAGCGTAA GGTAAGATTA GCTGAAGGTA TTGGTGAGGA TGGCAAGTTA AATCCAGAGG TTATGCAACG TGGTCTCGAT TGTCTTGCCA TGTTTGCGCA GATGCTGACA CAGCATAAAA TTCATCAAGA TCATGTCGCA GTCATCGCCA CCGCCACTCT TCGTAGTATC AGTAATGCCG ATGAGTTTAA TGAGCGTGCA TTGCCTCTAC TTGGGCATTC CATTGAGATT ATCTCTGGGA TGCGCGAAGC CGAGCTTATC TACCAAGGTA TGGTGGCTAC CACCTGTGGG CAAGGGCGGC GTTTAGTGAT CGATATTGGC GGTGCCAGTA CTGAGTTTAT TATTGGCGAT GGTCATCAAG TGTTGTTTAA AACCAGCTTG CCTATGGGAA GCGTGACTTA TAATCGCCAA TTTTTCAGTA ATATGCCTTT TCAACAGTTA GATTTTGATG ATGCGAAACA GCAGGTTTTA GTCACTCTGG CTGAGCATAG GAAGACACTG CGTGACTTAG GTTGGCATTG TGTAGTGGGA GCCTCTGGCG CGGTGCAATC TGTGGTTGAA GTACTATTAC ATCGAGAGCA ATCTGAAACC ATCACCCTTG AAGTGCTTAA TCAGCTAAAG GCTGAAATTC TCGTTCAAGA GGATAGGCAG CTTTTGGGGA TCCATGGTTT AAGTAGCGAA CGTGCTCCGA CCTTTGCCGC GGGTGTTGCG ATCCTATTAG CACTATTTGA GCTATTGGGT ATTGAGCATC TAAGCCTATC GGGTGGCGCA TTACGTGAGG GTGTATTAAT AATGTTAGCG CAGCGGATCC TTGAAGAAGC AATTTAG
|
Protein sequence | MPTPAYAAIT LGSNSFNMLI AKTKGGQPHI IAKYKRKVRL AEGIGEDGKL NPEVMQRGLD CLAMFAQMLT QHKIHQDHVA VIATATLRSI SNADEFNERA LPLLGHSIEI ISGMREAELI YQGMVATTCG QGRRLVIDIG GASTEFIIGD GHQVLFKTSL PMGSVTYNRQ FFSNMPFQQL DFDDAKQQVL VTLAEHRKTL RDLGWHCVVG ASGAVQSVVE VLLHREQSET ITLEVLNQLK AEILVQEDRQ LLGIHGLSSE RAPTFAAGVA ILLALFELLG IEHLSLSGGA LREGVLIMLA QRILEEAI
|
| |