Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3425 |
Symbol | |
ID | 5079816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3996607 |
End bp | 3997533 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640500624 |
Product | prepilin peptidase |
Protein accession | YP_001184934 |
Protein GI | 146294510 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.195496 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAT TTATCACTTT ATTAGGCCAA TCTTTTGAAC AGAGTCCTTG GCTCTTCGTC ACCTTAAGCT TTATTTTTGC CGCGACTATT GGCAGTTTTC TGAATGTGGT CATCCACCGA CTCCCTATCA TGATGAAGCG TGAATGGCAG CAGGAATGTA ATCAATATTT ACAGGAATAC CATGCCGATA TCGTTAACCA AGTCGGTATC GATAGGCTTA ATAAACCCAT AGATAGCTAT CCCGAAAAGT ACAATATTGT GGTGCCAGGC TCAGCTTGCC CTCAGTGTAA AACCGCCATC AAACCTTGGC ATAATATGCC TGTGCTCGGT TGGTTAATCC TTAGGGGGAA ATGCGCCGCC TGTCATGCAC CTATCTCGAC CCGTTATCCG ATTATTGAAT TAATCACAGG TTTACTGATC GCTGCTTTAG CTTGGCATTT TGGCCCAAGT TGGCAATTTG TTTTTGCCTC TTTACTCACC TTTGTATTGA TTGCGCTGAC AGGTATAGAT CTGGATGAAA TGTTGTTACC GGATCAGTTA ACACTGCCCC TACTGTGGCT TGGGCTATTA CTCAATTTAC ACCATACCTT TGCTAGCCCA ACGGATGCCA TTATCGGTGC AGCCGCAGGC TATTTAAGCC TATGGTCAAT TTTCTGGGTG TTTAAGTTAC TCACAGGCAA AGAAGGTATG GGCTATGGCG ACTTTAAACT GTTGGCCGTT TTTGGTGCTT GGCTTGGCTG GCAAATGTTG CCACTGGTGA TTTTACTCTC CTCATTAGTG GGTGCTGTTG TGGGCATTGG CATGATTATC AGCAAACGTA ATCAGATGGA TAACCCTATT CCCTTTGGCC CTTATATTGC CGCCGCAGGC TGGATTGCAC TGGTTTGGGG AAACACTATC GTCGACTGGT ATTTAGGGAC ACTATAA
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Protein sequence | MTEFITLLGQ SFEQSPWLFV TLSFIFAATI GSFLNVVIHR LPIMMKREWQ QECNQYLQEY HADIVNQVGI DRLNKPIDSY PEKYNIVVPG SACPQCKTAI KPWHNMPVLG WLILRGKCAA CHAPISTRYP IIELITGLLI AALAWHFGPS WQFVFASLLT FVLIALTGID LDEMLLPDQL TLPLLWLGLL LNLHHTFASP TDAIIGAAAG YLSLWSIFWV FKLLTGKEGM GYGDFKLLAV FGAWLGWQML PLVILLSSLV GAVVGIGMII SKRNQMDNPI PFGPYIAAAG WIALVWGNTI VDWYLGTL
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