| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3413 |
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| Symbol | |
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| ID | 5078035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3974221 |
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| End bp | 3976437 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640500613 |
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| Product | patatin |
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| Protein accession | YP_001184923 |
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| Protein GI | 146294499 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.016604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGCC GAATACTCGC TTCCCTCTTT TTATGCTTGT TATTTACCCC CTTAATTGCA
GCTGAGCGAC CTAAAATTGG GGTAGTACTC AGTGGTGGTG GAGCGAAAGG TGCAGCCCAT
GTGGGCGTAC TTAAAATATT AGAGGAACAT AATATCCCTG TGGATTACAT TGCGGGCACG
AGTATCGGCG CTTATGTCGC AGGAATGTAT GCGCTTGGTT ACAGCGCCAG TGAAGTTGAA
AGTATTATGA TGGGCGTTGA TTGGGATAGT GGCTATTCGG ATACGATCCC CCGGAATATT
TTGAGTTTTA GGGATAAACA GTTACGCGAT CGTTACAATA TTCCCCTTAA TATCGGTTAC
AACGAAGGTG AAGTGAGGGC GCCAAGTGGT GTGTTACGGG GGCAGACAAT GTCACAGCTA
CTCAGGCAAT CAACTGATTT AGTACAACAA TTTGGAAATT TTGATGATTT AGCGATTCCC
TACCGCGCGG TGGCAACTGA TTTGGAAACG AGTCAACCCG TGATCATTAG CCATGGTAGC
CTAGTGAATG CGATGCAAGC CTCTGCGACT GTGCCTGGTG CGCTTCAACC TACACAATTT
GAGGGTAAAC TGCTCGTAGA TGGGGGAATT GCGAATAATA TGCCTGTGGA TGTAGTTAAA
GCCATGGGGG CCGACATTAT TATTGCCGTC GATATTGGTT CACCTCTAGT CAAAAAAGAT
AAGTTATACA GCACCATAGC GGTACTCGAT CAGTTATCAA ACTTTCTGAC CAACGCTAGC
ACCGAGAAGC AAAAACAGCT ATTAACAGAT AAAGATGTGC TAATTCGTCC CGCTATTGAT
GCCTTAAGTA CAACCGATTT TACTATCATG CCTCTAGCAT TAACCCTCGG CAAAGAAGCG
GCAAATAACC ATCTCGATAA ACTGAGCAGC TTGAGTTTGA GCCCAGATGA ATATGCTGCT
TATGTTGATG CGAAAAGAGT TAAAGGCAAA ACCTTGATGA CGGATGTGTC GCATCCTATT
CACGAAATTG TATTTGATAA CCAATCGAAG GTCAGCTTAA ACCTCCTAAA AGAAACGTTA
AATCTGCAGA AGGGGCAAAC CGTTTCTAAA GATGAATTAA ATGAAGCATT AAAACGCATT
TATTCTCTGA ATAAATTTGA ACGTGTTGAT GCTGAGTTTG TTGAAGGAGA AGAGGGGCGC
ATACTCACAG TGACGACTAA AGCGAAGTCT TGGGGACCGA ATTATTTTCA GTTAGGCTTT
AATTGGGAGG ATGATTTTAA CGCCGATTCA GCCATCAGTT TTGATATGGC ATACACTATG
ACGGATTTAA CGTTCAATGG TGGTGAGTGG CGCAATGAAG TCAAACTGGG ATTTGAAAAA
TTATTTGCCA CTGAATTTTA TCAACCACTC GATAGGGATC AGGAGTTCTT TAGTCGGGCC
AGATATCAAT ACGATATCCG TAATTGGGAT CTTTTTGATA ATAATAGCCG CGTCTTAATT
TTCGATAAGA AAACCCATAC TGTTGAGTTA GGTATTGGTT ATAACTATAC CCTTCAGGGA
AGTATTGAAT TGGGTGTTGT TGGTGAAAAA GGCACGATAG AAAATGATGC TTGGTTAATT
GATGATTTAG ACTTCAGCTC CTATGGTGCC TACTTGAGGT TTGGCTACGA TAGCTTAGAT
AGCATTAGTT TCCCAACATC AGGAAATCGA ATCACGCTGA ATGTCTATGT TCGTAATGAA
GATTTTGATG ATGTTATCGA CAACAATGAA AATAATTATA GTGTACAGAT AGAAGCGGAT
TGGAAAGGTG CTCTCAGTGT AGGCAATCAT GCTTTTGTGG GTAAGACTTC TATTGCGACC
AACAATAATG ACGGTATCAA TACACTTCAT CTATCTGATC TGGGCGGATT CTTAAATCTT
TCTGGTTACC ATAAAGACTC GCTTACTGGG GCACATAAGT TATTTGGTGC TTTTATTTAC
CAATACGATC TTGGGCGTGA TGCCCTCGGT ATGACGGATT ATCCTCTCTA TCTTGGTTGG
AGTTTAGAGG CTGGAAATGT TTGGTTTGAG CGCAGTGAGG TTTCATTGAC GGATCTGATT
TATGCATCAA GTCTATATGT TGGGACTGAT ACCGCATTGG GGCCAGCAGC ATTAGGATTT
GGGATCACCG ATTTTGGAGA TCGATCTTTC TATCTGTTTG TGGGTAAAAA CTTTTAA
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| Protein sequence | MMRRILASLF LCLLFTPLIA AERPKIGVVL SGGGAKGAAH VGVLKILEEH NIPVDYIAGT
SIGAYVAGMY ALGYSASEVE SIMMGVDWDS GYSDTIPRNI LSFRDKQLRD RYNIPLNIGY
NEGEVRAPSG VLRGQTMSQL LRQSTDLVQQ FGNFDDLAIP YRAVATDLET SQPVIISHGS
LVNAMQASAT VPGALQPTQF EGKLLVDGGI ANNMPVDVVK AMGADIIIAV DIGSPLVKKD
KLYSTIAVLD QLSNFLTNAS TEKQKQLLTD KDVLIRPAID ALSTTDFTIM PLALTLGKEA
ANNHLDKLSS LSLSPDEYAA YVDAKRVKGK TLMTDVSHPI HEIVFDNQSK VSLNLLKETL
NLQKGQTVSK DELNEALKRI YSLNKFERVD AEFVEGEEGR ILTVTTKAKS WGPNYFQLGF
NWEDDFNADS AISFDMAYTM TDLTFNGGEW RNEVKLGFEK LFATEFYQPL DRDQEFFSRA
RYQYDIRNWD LFDNNSRVLI FDKKTHTVEL GIGYNYTLQG SIELGVVGEK GTIENDAWLI
DDLDFSSYGA YLRFGYDSLD SISFPTSGNR ITLNVYVRNE DFDDVIDNNE NNYSVQIEAD
WKGALSVGNH AFVGKTSIAT NNNDGINTLH LSDLGGFLNL SGYHKDSLTG AHKLFGAFIY
QYDLGRDALG MTDYPLYLGW SLEAGNVWFE RSEVSLTDLI YASSLYVGTD TALGPAALGF
GITDFGDRSF YLFVGKNF
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