Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3410 |
Symbol | |
ID | 5078032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3970895 |
End bp | 3971548 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640500610 |
Product | 2-deoxyglucose-6-phosphatase |
Protein accession | YP_001184920 |
Protein GI | 146294496 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0110715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACATCCC TTAGTATTCA AGCCGTTATT TTTGATATGG ATGGCGTGTT AATTGATTCA GAACCCCTGT GGCAACGTAT TGAATACGAT GTTTTATCCG CACTCGGCGT CCCTGTCACT ATCGAAACGA TTCAGCAAAC CACGGGGCTG CGTATCGACC AATGTGTCGA TTATTGGTAT CACAAGGCGC CTTGGGCCGA TTACGACAAT ACTAAGGTCA GCAAAGCCAT AGTTGACAAA GTTGCTGAAG AAATTCGGCA AACCGGTGAA CCTATGCCTG GCGTTCAGCA AGCAATAGCA TACTGCCAAG CCAAAGGATT AAAAATAGGC TTAGCGACCT CATCACCAAC AGCTTTGATT GACGCAGTGC TGGCAAGACT TAAGCTCAAG AGCCAATTTA TGGCAGTAGA ATCAGCAGAG GCGCTCACCT ATGGCAAACC ACATCCCGAG GTTTATCTCA ATTGTGCGAC CGCTCTAGGG GTCGATCCAC GTTATTGCCT TGCCATCGAA GACTCTTTCA ATGGCCTGAT TGCGGCCCGC GCCGCCAATA TGCAAACTGT TGCTATCCCT GCGCTAGAGC AACGCGGCGA GGCCAAATGG ATAATTGCTC ACCACCAATT GGAGAGTTTG TCTGAGCTAA ACAAAGTGTT ATAG
|
Protein sequence | MTSLSIQAVI FDMDGVLIDS EPLWQRIEYD VLSALGVPVT IETIQQTTGL RIDQCVDYWY HKAPWADYDN TKVSKAIVDK VAEEIRQTGE PMPGVQQAIA YCQAKGLKIG LATSSPTALI DAVLARLKLK SQFMAVESAE ALTYGKPHPE VYLNCATALG VDPRYCLAIE DSFNGLIAAR AANMQTVAIP ALEQRGEAKW IIAHHQLESL SELNKVL
|
| |