Gene Sputcn32_3410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3410 
Symbol 
ID5078032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3970895 
End bp3971548 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content48% 
IMG OID640500610 
Product2-deoxyglucose-6-phosphatase 
Protein accessionYP_001184920 
Protein GI146294496 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0110715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCCC TTAGTATTCA AGCCGTTATT TTTGATATGG ATGGCGTGTT AATTGATTCA 
GAACCCCTGT GGCAACGTAT TGAATACGAT GTTTTATCCG CACTCGGCGT CCCTGTCACT
ATCGAAACGA TTCAGCAAAC CACGGGGCTG CGTATCGACC AATGTGTCGA TTATTGGTAT
CACAAGGCGC CTTGGGCCGA TTACGACAAT ACTAAGGTCA GCAAAGCCAT AGTTGACAAA
GTTGCTGAAG AAATTCGGCA AACCGGTGAA CCTATGCCTG GCGTTCAGCA AGCAATAGCA
TACTGCCAAG CCAAAGGATT AAAAATAGGC TTAGCGACCT CATCACCAAC AGCTTTGATT
GACGCAGTGC TGGCAAGACT TAAGCTCAAG AGCCAATTTA TGGCAGTAGA ATCAGCAGAG
GCGCTCACCT ATGGCAAACC ACATCCCGAG GTTTATCTCA ATTGTGCGAC CGCTCTAGGG
GTCGATCCAC GTTATTGCCT TGCCATCGAA GACTCTTTCA ATGGCCTGAT TGCGGCCCGC
GCCGCCAATA TGCAAACTGT TGCTATCCCT GCGCTAGAGC AACGCGGCGA GGCCAAATGG
ATAATTGCTC ACCACCAATT GGAGAGTTTG TCTGAGCTAA ACAAAGTGTT ATAG
 
Protein sequence
MTSLSIQAVI FDMDGVLIDS EPLWQRIEYD VLSALGVPVT IETIQQTTGL RIDQCVDYWY 
HKAPWADYDN TKVSKAIVDK VAEEIRQTGE PMPGVQQAIA YCQAKGLKIG LATSSPTALI
DAVLARLKLK SQFMAVESAE ALTYGKPHPE VYLNCATALG VDPRYCLAIE DSFNGLIAAR
AANMQTVAIP ALEQRGEAKW IIAHHQLESL SELNKVL