Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3352 |
Symbol | |
ID | 5078127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3900712 |
End bp | 3902193 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640500553 |
Product | UbiD family decarboxylase |
Protein accession | YP_001184863 |
Protein GI | 146294439 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTTA AGGATTTACG CAGCTTTATT GATCACTTAG AAGCCAATGG CGAACTCAAA CGCATTAGCT ACCCAGTTGA TCCTCATTTA GAAATGACAG AGATCGCCGA TCGCGTTCTG CGCGCTAAAG GCCCTGCACT CTTGTTTGAA AATCCCAAAA ATCACCACAT GCCCGTGCTG GCAAACCTGT TTGGTACGCC AAAACGTGTA GCTATGGCGC TCGGCAAAGA CGATCCTTTA GCCCTACGTG AAGTGGGCGA ACTGTTAGCC TTTTTAAAAG AGCCCGAGCC GCCACGCGGT TTTAAAGACG CGATCGCTAA GATCCCTATG TTCAAGCAAG CCTTGAATAT GCCGCCAAAG ACAGTGCGTA ATCCGCCTTG CCAACAAATC ATCAAAACTG GCGATGAGGT CGACTTAACC CAATTACCTA TTCAGCATTG CTGGCCGGGC GATGTCGCAC CGCTGGTGAC ATGGGGCTTA ACCATCACCA AAGGCCCGCG TAAGAGTCGC CAGAATTTAG GTATTTATCG CCAACAATTA CTGGGCAAAA ACAAGCTGAT TATGCGCTGG TTATCCCACC GTGGCGGCGC GTTAGATTTT GCTGATTTTA AAGAGCAATT CCCCGGTGAA CGCTATCCGG TTGTGGTCGC ACTTGGCGCC GATCCTGTAA CCATTTTAGG TGCCGTCACC CCAGTCCCCG ATTCCATGAG CGAATATGCT TTTGCCGGTT TACTGCGCGG TGAACGCACC GAAGTCTGCA AAGCATTAAG CTGTGACTTA GAAGTGCCCG CCACCAGTGA AATCATCCTC GAAGGTTATA TCGACCCAGA GGAATTGGCG GAAGAAGGCC CCTACGGCGA TCACACGGGC TACTACAACG AAACCGATAA GTTTCCAGTA TTTACCGTTA CCCACATCAC GCAGCGTAAA GATGCCATCT ACCACAGCAC TTACACTGGC CGTCCACCGG ATGAGCCCGC TATGCTGGGG GTTGCCTTAA ACGAAGTGTT TGTACCGATT TTGCGTAAGC AATACCCTGA GATCGTTGAC TTTTATCTGC CGCCTGAGGG TTGTTCGTAC CGCATGGCAG TGATCTCCAT TCGCAAACAA TATCCGGGAC ATGCCAAACG AGTGATGATG GGCGCTTGGT CTTTCCTGCG CCAATTTATG TACACTAAGT TTATTGTCAT CGTCGATGAA GATGTGAACT GCCGCGATTG GCAGGATGTG ATCTGGGCGA TCACCACCCG CATGGACCCT AAACGCGATA CCGTGATGAT CGAAAACACC CCCATCGACT ACCTCGATTT TGCCTCACCC GTTGCGGGCT TAGGCTCAAA AATGGGACTC GATGCCACCA ATAAGTGGGA AGGTGAAACT AATCGCGAAT GGGGCACGCC CATCGTGATG GATCCAAAAG TAAAACAAAA GATCGACTCA ATCTGGGATG AGTTAGGCAT AGACGACAGC CCAACCCTAT AA
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Protein sequence | MSFKDLRSFI DHLEANGELK RISYPVDPHL EMTEIADRVL RAKGPALLFE NPKNHHMPVL ANLFGTPKRV AMALGKDDPL ALREVGELLA FLKEPEPPRG FKDAIAKIPM FKQALNMPPK TVRNPPCQQI IKTGDEVDLT QLPIQHCWPG DVAPLVTWGL TITKGPRKSR QNLGIYRQQL LGKNKLIMRW LSHRGGALDF ADFKEQFPGE RYPVVVALGA DPVTILGAVT PVPDSMSEYA FAGLLRGERT EVCKALSCDL EVPATSEIIL EGYIDPEELA EEGPYGDHTG YYNETDKFPV FTVTHITQRK DAIYHSTYTG RPPDEPAMLG VALNEVFVPI LRKQYPEIVD FYLPPEGCSY RMAVISIRKQ YPGHAKRVMM GAWSFLRQFM YTKFIVIVDE DVNCRDWQDV IWAITTRMDP KRDTVMIENT PIDYLDFASP VAGLGSKMGL DATNKWEGET NREWGTPIVM DPKVKQKIDS IWDELGIDDS PTL
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