Gene Sputcn32_3339 details

Gene Information

• Locus tag: Sputcn32_3339
• Symbol: mscL
• ID: 5078114
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 3888148
• End bp: 3888558
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640500540
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_001184850
• Protein GI: 146294426
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCTTAA TTAAAGAGTT CAAGGCTTTT GCGTCCCGCG GCAATGTGAT CGATATGGCC 
GTTGGTATCA TCATAGGTGC CGCATTCGGC AAAATCGTCT CGTCCTTCGT GGCCGATGTC 
ATCATGCCAC CGATTGGTAT CATCCTAGGT GGTGTGAATT TTAGTGATTT GAGCATAGTG 
CTTCAGGCAG CCCAAGGTGA TGCGCCTTCT GTGGTCATTG CCTATGGCAA ATTCATTCAA 
ACCGTTATCG ACTTTACGAT TATCGCCTTC GCGATTTTTA TGGGTTTAAA AGCCATTAAC 
ACCCTAAAAC GCAAGGAAGA AGAAGCGCCT AAAGCACCAC CCGCACCGAC CAAAGAAGAA 
GAGTTGCTGT CTGAAATCCG CGATCTATTG AAAGCTCAAC AAGAAAAATA A 

 

Protein sequence

MSLIKEFKAF ASRGNVIDMA VGIIIGAAFG KIVSSFVADV IMPPIGIILG GVNFSDLSIV 
LQAAQGDAPS VVIAYGKFIQ TVIDFTIIAF AIFMGLKAIN TLKRKEEEAP KAPPAPTKEE 
ELLSEIRDLL KAQQEK