| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3302 |
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| Symbol | |
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| ID | 5078375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3850547 |
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| End bp | 3853453 |
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| Gene Length | 2907 bp |
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| Protein Length | 968 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640500503 |
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| Product | ATP-dependent helicase HepA |
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| Protein accession | YP_001184813 |
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| Protein GI | 146294389 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTTCG CCTTAGGTCA ACGTTGGATA AGTGATACCG AGTCAGAGCT TGGTTTAGGA
ACTGTGGTTC AAGTAGAAGG CCGTATGGTC ACGGTGTTAT TCCCTGCAAC GGGTGAGAAT
CGCATGTTCT CCCGAGCAGA AGCCCCTCTG ACACGCGTCA CCTATAATTC CGGCGATACG
GTTGAAAGCC ACGAAGGTTG GAGCTTAACC ATTGAAGAGC TTACTGAAAA AGACGGCTTA
GTGATTTATC ACGGTATTCA TAGTGAAACG GGCGAGCAAG TTACTCTGCG CGAAACTTTG
TTAAATCACA ATATTCGCTT TAATAAACCC CAAGACCGTT TGTTTGCCGG CCAAATTGAC
CGTCTGGATC GTTTTGGTGT GCGTTATCAG TGCCAAATGC TACGCCATAA ACTGGCAACC
TCTGATTTAC TCGGTCTGCA AGGTCCGCGA GTTGGCCTGA TCCCACACCA AATGTGGATT
GCCCATGAAG TCGGCCGCCG TTATGCACCG CGGGTATTAC TCGCCGACGA AGTGGGTTTA
GGCAAAACCA TTGAGGCAGG CCTGATTATT CATCAACAAC TGTTGACCGG TCGCGCCGAG
CGAGTACTCG TTATCGTCCC TGATACTCTG CGTCACCAGT GGTTAGTCGA AATGCTACGC
CGTTTTAACC TGCGTTTTTC AGTGTTTGAT GAAGACCGTT GTGTGGAAGC CTACGCCGAC
CATGACAACC CTTTCTATAC AGAACAGTTA GTGATTTGTT CACTCGAATT ACTGCGTAAA
AAGAAACGCC TCGATCAAGC CTTAGATGCC GATTGGGATT TATTAGTCGT CGATGAGGCG
CATCATTTAG AGTGGACCGA AGAAGCACCA AGCCGTGCCT ACCAAGTGGT TGAAGCTTTA
AGTGAAGTCG TGCCCGGCGT ATTACTATTA ACGGCAACGC CAGATCAACT CGGCCACGAA
AGCCACTTTG CGCGTTTGCG TCTGCTCGAT CCAGATCGTT TCTACGATTA CGATGCCTTC
CTCGCCGAAG AAGACAGCTA TAAAGATGTC GCTATGGCCG CAGAAGCGCT CGCGGGCAAC
GCAAAATTAC CCGATGCAGC GATTAATAGC CTGACCGAAT TACTCAGCGA AAAAGACATA
GCGCCGAGCA TTCGCTTAAT CCAAGCCGAC GGCATAGATA GCGAACTACA ACAGGCCGCC
CGCAGCGAAT TACTGCAAGA ACTGCTCGAC CGTCACGGCA CGGGTCGCGT GCTCTACCGT
AACAGCCGCG CCTCGGTAAA AGGCTTTCCA AAGCGCTTTT TTAATCCGCA TCCTCAAACC
ATGCCAGAGC AATACCTCAC AGCTGCGCGC GTGAGTAGTA TGATGGGCGG GCATAAAACC
TTAGAGGCCA AAGCTGCGCA AGCCTTAAGC CCTGAAAAAC TGTATCAAGA ATTTGAAGAT
AACAGCGCCA GTTGGTGGAA ATTCGATCCC CGTGTGGATT GGTTGATCGC GTTTTTAAAA
TCCCACCGCA GTAAGAAAGT GCTTATCATC GCTAGCCAAG CGGAAACTGC ACTCAGCCTT
GAAGAAGCCC TGAGAACCAG AGAAGGTATT CAAGCAACCG TATTCCACGA AGGCATGTCG
ATTATCGAGC GCGATAAAGC GGGCGCTTAC TTTGCCCAAG AGGAAGGTGG CGCACAGGCA
CTGATCTGTT CTGAAATTGG CTCAGAAGGT CGTAATTTCC AGTTTGCCAG CCACTTAGTA
CTGTTCGATT TACCGCTCAA CCCTGACTTG CTAGAACAAC GTATCGGGCG TTTAGATCGT
ATCGGTCAAA AAAATGATAT CCAAATTCAC TTGCCCTACC TTGAAGATAC CGCCCAAGAA
CGCCTAATGC AGTGGTATCA CCAAGGGCTC AATGCCTTTG AACTCACTTG CCCAAGCGGC
CATGTGCTTT ACGCTGAATT TGCTGAAGAT TTGCTCAATG TACTTGTGGG TGATGACGCG
GATGAACTCA CGAATCTGCT CAACCATACT CAGACCCGCT ATAAAGAACT CAAGCACGCC
ATGGAACAGG GCCGCGATAA GCTGCTGGAA ATCAACTCCC ACGGTGGCGA TAGGGCAAAG
GCCATTGTTG AGCGTCTTGC CCAAAACGAT GAGAACACCC AACTCATTGG ATCAGTGATC
CGTCTATGGG ACATTATTGG TGTCGATCAA GAGGATAAGG GTGAGAATTC CATTATCCTG
CGCCCGAGTG AACATATGAT GTTCCCAACA TACCCTGGCT TGCCAGAAGA TGGCGTAACT
GTGACCTTTG ACCGCGACAC AGCACTTTCG CGTGATGATA TTGCGCTGAT CACCCAAGAA
CATCCATTAG TGCAAACGGG CTTAGATTTG ATCACAGGCT CAGAAACGGG CACTACCAGT
GTCGCAGTAT TGAAAAATAA AGCCCTCCCT GCTGGCACAT TATTCTTAGA ACTCATCTAC
ATGGCCGATG CTTCTGCGCC TAAGTCGAGC CAGTTATACC GTTACTTACC ACCCACACCT
ATCCGCATCT TGCTGGATAA AAATGGGAAT GATCTGTCGG CCAAAGTGGA TTACGCCAGC
TTTGATAAGC AACTGAGTGC GGTAAATCGG CATATCGGCG GAAAGTTAGT GACTGCATCA
CAACCAATCT TGCATCCACT GTTTGCCAAA GGTGAAGAAT ACGCACAGGC CGCTGTTGAT
GAGTTAGTGA TACAAGCGCG TGAGAAAATG ACAACACAAC TCACGGGAGA ATTAGACCGC
TTAGAGTCCC TCAAAGCCGT CAACCCCAAT ATTCGTGAAG AAGAGTTGGA ATATCTGCGT
AACCAAATGC AAGAACTCAA CACCTATCTT GACGCCAGTC AGCTACAGCT TGATGCCATT
CGTATGGTAT TGGTCAGCCA TGTGTAA
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| Protein sequence | MPFALGQRWI SDTESELGLG TVVQVEGRMV TVLFPATGEN RMFSRAEAPL TRVTYNSGDT
VESHEGWSLT IEELTEKDGL VIYHGIHSET GEQVTLRETL LNHNIRFNKP QDRLFAGQID
RLDRFGVRYQ CQMLRHKLAT SDLLGLQGPR VGLIPHQMWI AHEVGRRYAP RVLLADEVGL
GKTIEAGLII HQQLLTGRAE RVLVIVPDTL RHQWLVEMLR RFNLRFSVFD EDRCVEAYAD
HDNPFYTEQL VICSLELLRK KKRLDQALDA DWDLLVVDEA HHLEWTEEAP SRAYQVVEAL
SEVVPGVLLL TATPDQLGHE SHFARLRLLD PDRFYDYDAF LAEEDSYKDV AMAAEALAGN
AKLPDAAINS LTELLSEKDI APSIRLIQAD GIDSELQQAA RSELLQELLD RHGTGRVLYR
NSRASVKGFP KRFFNPHPQT MPEQYLTAAR VSSMMGGHKT LEAKAAQALS PEKLYQEFED
NSASWWKFDP RVDWLIAFLK SHRSKKVLII ASQAETALSL EEALRTREGI QATVFHEGMS
IIERDKAGAY FAQEEGGAQA LICSEIGSEG RNFQFASHLV LFDLPLNPDL LEQRIGRLDR
IGQKNDIQIH LPYLEDTAQE RLMQWYHQGL NAFELTCPSG HVLYAEFAED LLNVLVGDDA
DELTNLLNHT QTRYKELKHA MEQGRDKLLE INSHGGDRAK AIVERLAQND ENTQLIGSVI
RLWDIIGVDQ EDKGENSIIL RPSEHMMFPT YPGLPEDGVT VTFDRDTALS RDDIALITQE
HPLVQTGLDL ITGSETGTTS VAVLKNKALP AGTLFLELIY MADASAPKSS QLYRYLPPTP
IRILLDKNGN DLSAKVDYAS FDKQLSAVNR HIGGKLVTAS QPILHPLFAK GEEYAQAAVD
ELVIQAREKM TTQLTGELDR LESLKAVNPN IREEELEYLR NQMQELNTYL DASQLQLDAI
RMVLVSHV
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