| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3240 |
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| Symbol | |
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| ID | 5080081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3766950 |
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| End bp | 3768200 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640500437 |
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| Product | Rh family protein/ammonium transporter |
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| Protein accession | YP_001184751 |
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| Protein GI | 146294327 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter
[TIGR03644] probable ammonium transporter, marine subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.212447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGAAT TAACAAAATT AGGCGTTACA GTCACAGAAC TACGCTTTGC ACTTGATACC
TTTTACTTTT TAATCTCAGG TGCTTTAGTG ATGTGGATGG CTGCGGGGTT TGCCATGCTA
GAAGCGGGCT TAGTACGCTC AAAAAATACT ACTGAAATTT TAACTAAAAA CGTGGTTCTT
TATGCAATTG CCTGTGTGAT GTACCTCTTA GTCGGCTACA ACATTATGTA TGTCGATAAT
ACCGAGGGCG GTTGGATACC CTCCATCGGC ACTTTAATCG GTTCACAATC TGCTGATGCG
AGCCATGCGT TAGAGTCTGA CTTCTTCTTC CAAGTGGTGT TTGTGGCAAC GGCGATGTCA
ATCGTTTCAG GTGCAGTGGC TGAACGCATG AAGTTATGGG CGTTTCTTTG TTTCGCCATC
GTCATGACTG GGGTGATTTA TCCTATTGAA GGGTATTGGA CATGGGGCCA AGGATTTATT
GCCAAACTCG GTTTTGTTGA TTTTGCAGGT AGTGGCATAG TGCATATGAC TGGCGCTGCA
GCTGCAATTG CTGGGGTGCT CTTACTCGGC GCTCGTAAAG GCAAATACGG CCCTAATGGT
CAAGTCAATC CCATTCCTGG TTCTAACTTA CCCATGGCAA CCTTAGGTAT GTTTATTCTG
TGGATGGGGT GGTTTGGGTT TAATGGTGGC TCTCAACTTA TGGTGTCTGA TGCTGAAAAC
GCAAGTTCAG TGGCAAAAGT GTTTATGAAT ACCAATACTG CCGCGGCCTT TGGCGCTATT
TCTGCCCTTA TTGTATGTAA AATGATTTGG GGGAAAGCAG ACTTAACAAT GATTTTAAAC
GGTATTCTAG CGGGTTTAGT CGCAATCACT GCCGATCCTT TATCTCCTTC ATTTTTAATG
GCGGGCGTCA TTGGCTTGGT TGCTGGTGGT GTAGTGGTGT TCTCCATTGT CGGATTAGAT
CGCGTTAAGA TTGATGATCC TGTCGGGGCT ATTTCAGTTC ATGGTGTGGC AGGTTTTCTT
GGTCTGATGT GCGTACCTTT ATCGAATGCT GATGCAACCA TTACGGCACA GCTAACTGGT
GCTGCGATTA TCTTTGCTTG GGTATTTTGT TCCTCATTTG TCGTATGGTC TATTATCAAA
ATGACTATGG GTATTCGAGT TTCTGAGGAG GAAGAATATA ACGGTATGGA TGCTTCCGAT
TGCGGTATCG ACGCTTATCC TGAGTTTGTG ACAGTAAAAA ATGCCAGCTA A
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| Protein sequence | MEELTKLGVT VTELRFALDT FYFLISGALV MWMAAGFAML EAGLVRSKNT TEILTKNVVL
YAIACVMYLL VGYNIMYVDN TEGGWIPSIG TLIGSQSADA SHALESDFFF QVVFVATAMS
IVSGAVAERM KLWAFLCFAI VMTGVIYPIE GYWTWGQGFI AKLGFVDFAG SGIVHMTGAA
AAIAGVLLLG ARKGKYGPNG QVNPIPGSNL PMATLGMFIL WMGWFGFNGG SQLMVSDAEN
ASSVAKVFMN TNTAAAFGAI SALIVCKMIW GKADLTMILN GILAGLVAIT ADPLSPSFLM
AGVIGLVAGG VVVFSIVGLD RVKIDDPVGA ISVHGVAGFL GLMCVPLSNA DATITAQLTG
AAIIFAWVFC SSFVVWSIIK MTMGIRVSEE EEYNGMDASD CGIDAYPEFV TVKNAS
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