Gene Sputcn32_3236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3236 
Symbol 
ID5080077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3762642 
End bp3764438 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content43% 
IMG OID640500433 
ProductABC transporter related 
Protein accessionYP_001184747 
Protein GI146294323 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00224105 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCCAA CATCATATTT TGAAGGTCCA ATAGATAAGC TAAACTGGCA TGTCCTCAAG 
TTACTTTGGC CCTATTTGCT TGAATATAAA GGTCGTATTA CCTTGGCAAT GTCTTGTCTT
GTCGTCGCAA AACTGGCCAG TGTCGCATTA CCATTTATCC TTAAACAGTT AGTCGATACT
TTAGATGACG ATAAAACAAT ACAGGCATTA AGTGTTCCTG TTGGCCTAGT GCTTGCTTAC
GGTGCGGTGC GTTTATTGAC TGTTATTACT GGGGAAATAC GCGATACGCT ATTTGGTCGA
GTCACTGAAC GAGCTATCCG ACGTTTGGGG TTAGCGGTAT TTGATCATTT GCATCGGCTA
GATTTAGATT TTCACTTAGA GCGAAGAACG GGGGGCTTAT CACGGGATAT TGAGCGCGGC
ACGAGTGGTG TGAGTTTTTT AATGCGCTTT ATGGTATTCA ATATCGTGCC AACCTTACTC
GAAATTGCCA TGGTGATTGG TATTTTCTTC TTTAATTACG GTGTCGCCTT TGCATCAATT
ACTTTTTTCT CTGTACTGGC TTATATCCTT TTTTCCGTTA TTGCGACTGA ATGGCGCACC
GAATATGTGC GTGATGCAGC GAAAGCTGAT TCGCTATCCA ACACAAGGGC TATAGACAGT
TTACTGAACT ACGAAACTGT AAAGTACTTC AATAATGAGA AATATGAGTC TGAGCGATAT
GATCAAGCTC TGGACCAATG GGAAGTGGCG AAGCGAAAAA ACCGTTTATC GCTCTTTGCC
CTAAATGGAG GGCAGGCTTT AATTATTGCA TTAGCGATGA CGGCCATGAT GGCGCTAGCG
GCTTATCGTG TCACCTATGG CGAAATGACA TTGGGTGATT TTGTATTAAT TAACGCGTTT
ATGATGCAAC TCTTTATGCC ATTAAATTTT CTCGGTTTTG TTTATCGTGA AATCCGGGGT
GCCTTAGCTA ATATTGAACG TATGTTTAGC CTGCTTGATA AATATCCTAA GATCATCGAC
TCACCAAATG CCCTCGATTT TCAGCCATCA AAAGGTGAGC TTTCTTTTGA GAACGTCAAC
TTTAGCTATG ATGATAGACC TATTCTGCGG GATGTGAGTT TTAAGGTCGC TGCGGGTAAA
AAAGTTGCGG TTGTTGGTGA TAGTGGAGCA GGTAAATCGA CACTGATTAA ACTCCTTTTT
CGTTTCTATG ATGTTGATCA AGGCGCGATT AAGATCGATG GTCAAGATAT TCGTCATTTG
ACTCAAGATG CACTACGGCG TGCGATCGCG ATTGTACCGC AGGACACTGT ACTTTTTAAC
GATTCCTTAG TTGAGAATAT TCGTTATGGT CGCCCTGGCG CGAGTGATGA TGAAGTCCGA
AATGCCATTA AACTCGCACA CTTAGAACAG TTTATCGCTT CACTTTCCCA AGGTTGGGAT
ACTAAAGTGG GTGAGCGCGG CTTAAAGCTA TCTGGCGGAG AAAAGCAACG AGTCGCTATC
GCCAGAGCCA TTCTTAAGGG ATCGCCGGTG CTAGTGTTTG ATGAGGCAAC CTCATCACTG
GACAGTCGTT CTGAGCAGGC TATTTTATCG GCGCTACGTG AGGTGGCTAA AGGGCATACT
AGCTTAGTGG TTGCCCATAG ACTTTCGACA ATTGTGGATG CCGATCAAAT TGTTGTATTG
AGCCAAGGTA AGATAGTTGA ACAAGGTAAT CATGCTTCTT TGCTGGATAT GGGAGGGTTA
TACGCGAAAT TGTGGCGAAT ACAAAATGAG CAATCACAAG CCCCTGTGGA TGTTTAA
 
Protein sequence
MRPTSYFEGP IDKLNWHVLK LLWPYLLEYK GRITLAMSCL VVAKLASVAL PFILKQLVDT 
LDDDKTIQAL SVPVGLVLAY GAVRLLTVIT GEIRDTLFGR VTERAIRRLG LAVFDHLHRL
DLDFHLERRT GGLSRDIERG TSGVSFLMRF MVFNIVPTLL EIAMVIGIFF FNYGVAFASI
TFFSVLAYIL FSVIATEWRT EYVRDAAKAD SLSNTRAIDS LLNYETVKYF NNEKYESERY
DQALDQWEVA KRKNRLSLFA LNGGQALIIA LAMTAMMALA AYRVTYGEMT LGDFVLINAF
MMQLFMPLNF LGFVYREIRG ALANIERMFS LLDKYPKIID SPNALDFQPS KGELSFENVN
FSYDDRPILR DVSFKVAAGK KVAVVGDSGA GKSTLIKLLF RFYDVDQGAI KIDGQDIRHL
TQDALRRAIA IVPQDTVLFN DSLVENIRYG RPGASDDEVR NAIKLAHLEQ FIASLSQGWD
TKVGERGLKL SGGEKQRVAI ARAILKGSPV LVFDEATSSL DSRSEQAILS ALREVAKGHT
SLVVAHRLST IVDADQIVVL SQGKIVEQGN HASLLDMGGL YAKLWRIQNE QSQAPVDV