Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3236 |
Symbol | |
ID | 5080077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3762642 |
End bp | 3764438 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640500433 |
Product | ABC transporter related |
Protein accession | YP_001184747 |
Protein GI | 146294323 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00224105 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCCAA CATCATATTT TGAAGGTCCA ATAGATAAGC TAAACTGGCA TGTCCTCAAG TTACTTTGGC CCTATTTGCT TGAATATAAA GGTCGTATTA CCTTGGCAAT GTCTTGTCTT GTCGTCGCAA AACTGGCCAG TGTCGCATTA CCATTTATCC TTAAACAGTT AGTCGATACT TTAGATGACG ATAAAACAAT ACAGGCATTA AGTGTTCCTG TTGGCCTAGT GCTTGCTTAC GGTGCGGTGC GTTTATTGAC TGTTATTACT GGGGAAATAC GCGATACGCT ATTTGGTCGA GTCACTGAAC GAGCTATCCG ACGTTTGGGG TTAGCGGTAT TTGATCATTT GCATCGGCTA GATTTAGATT TTCACTTAGA GCGAAGAACG GGGGGCTTAT CACGGGATAT TGAGCGCGGC ACGAGTGGTG TGAGTTTTTT AATGCGCTTT ATGGTATTCA ATATCGTGCC AACCTTACTC GAAATTGCCA TGGTGATTGG TATTTTCTTC TTTAATTACG GTGTCGCCTT TGCATCAATT ACTTTTTTCT CTGTACTGGC TTATATCCTT TTTTCCGTTA TTGCGACTGA ATGGCGCACC GAATATGTGC GTGATGCAGC GAAAGCTGAT TCGCTATCCA ACACAAGGGC TATAGACAGT TTACTGAACT ACGAAACTGT AAAGTACTTC AATAATGAGA AATATGAGTC TGAGCGATAT GATCAAGCTC TGGACCAATG GGAAGTGGCG AAGCGAAAAA ACCGTTTATC GCTCTTTGCC CTAAATGGAG GGCAGGCTTT AATTATTGCA TTAGCGATGA CGGCCATGAT GGCGCTAGCG GCTTATCGTG TCACCTATGG CGAAATGACA TTGGGTGATT TTGTATTAAT TAACGCGTTT ATGATGCAAC TCTTTATGCC ATTAAATTTT CTCGGTTTTG TTTATCGTGA AATCCGGGGT GCCTTAGCTA ATATTGAACG TATGTTTAGC CTGCTTGATA AATATCCTAA GATCATCGAC TCACCAAATG CCCTCGATTT TCAGCCATCA AAAGGTGAGC TTTCTTTTGA GAACGTCAAC TTTAGCTATG ATGATAGACC TATTCTGCGG GATGTGAGTT TTAAGGTCGC TGCGGGTAAA AAAGTTGCGG TTGTTGGTGA TAGTGGAGCA GGTAAATCGA CACTGATTAA ACTCCTTTTT CGTTTCTATG ATGTTGATCA AGGCGCGATT AAGATCGATG GTCAAGATAT TCGTCATTTG ACTCAAGATG CACTACGGCG TGCGATCGCG ATTGTACCGC AGGACACTGT ACTTTTTAAC GATTCCTTAG TTGAGAATAT TCGTTATGGT CGCCCTGGCG CGAGTGATGA TGAAGTCCGA AATGCCATTA AACTCGCACA CTTAGAACAG TTTATCGCTT CACTTTCCCA AGGTTGGGAT ACTAAAGTGG GTGAGCGCGG CTTAAAGCTA TCTGGCGGAG AAAAGCAACG AGTCGCTATC GCCAGAGCCA TTCTTAAGGG ATCGCCGGTG CTAGTGTTTG ATGAGGCAAC CTCATCACTG GACAGTCGTT CTGAGCAGGC TATTTTATCG GCGCTACGTG AGGTGGCTAA AGGGCATACT AGCTTAGTGG TTGCCCATAG ACTTTCGACA ATTGTGGATG CCGATCAAAT TGTTGTATTG AGCCAAGGTA AGATAGTTGA ACAAGGTAAT CATGCTTCTT TGCTGGATAT GGGAGGGTTA TACGCGAAAT TGTGGCGAAT ACAAAATGAG CAATCACAAG CCCCTGTGGA TGTTTAA
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Protein sequence | MRPTSYFEGP IDKLNWHVLK LLWPYLLEYK GRITLAMSCL VVAKLASVAL PFILKQLVDT LDDDKTIQAL SVPVGLVLAY GAVRLLTVIT GEIRDTLFGR VTERAIRRLG LAVFDHLHRL DLDFHLERRT GGLSRDIERG TSGVSFLMRF MVFNIVPTLL EIAMVIGIFF FNYGVAFASI TFFSVLAYIL FSVIATEWRT EYVRDAAKAD SLSNTRAIDS LLNYETVKYF NNEKYESERY DQALDQWEVA KRKNRLSLFA LNGGQALIIA LAMTAMMALA AYRVTYGEMT LGDFVLINAF MMQLFMPLNF LGFVYREIRG ALANIERMFS LLDKYPKIID SPNALDFQPS KGELSFENVN FSYDDRPILR DVSFKVAAGK KVAVVGDSGA GKSTLIKLLF RFYDVDQGAI KIDGQDIRHL TQDALRRAIA IVPQDTVLFN DSLVENIRYG RPGASDDEVR NAIKLAHLEQ FIASLSQGWD TKVGERGLKL SGGEKQRVAI ARAILKGSPV LVFDEATSSL DSRSEQAILS ALREVAKGHT SLVVAHRLST IVDADQIVVL SQGKIVEQGN HASLLDMGGL YAKLWRIQNE QSQAPVDV
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