Gene Sputcn32_3214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3214 
Symbol 
ID5080157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp3742752 
End bp3743387 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content46% 
IMG OID640500411 
ProductyecA family protein 
Protein accessionYP_001184725 
Protein GI146294301 
COG category[S] Function unknown 
COG ID[COG3079] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02292] yecA family protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.112455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTTCAAG TCTTTATCTC TGCTAGCATT GCTGCTGGAA AATTCTTATT GGAATCTGAT 
ATGGCTACCC CTCCTTCGTT ACGCATCGAG AGCTTAAAAA TAGCCTTAGA TGCGGCTGAA 
ATTGGTCAGC ATCCCGTGGA AGTTCACGGT GCCCTCGTGG GTTTAATCTG CGGTGGCGTA 
GAGCAAACCG GCGATATGTG GATTAAGCCC TTATTCGACT TGATGAACGA TGGTCAACCA 
CTGCCTGCGC AGTTACATCA ATTAGTGTGT GAGTTATTCC AAGATTCGGT TGCGCGTTTA 
GTGGACTTTG AATTTGGTTT TACTCCTTTA CTACCCGAAG AGGAAGAACC GCTCAGTAAA 
CGTGTAGAGG CGCTATCCCT TTGGGCACAA AGTTTCTTAA CGGGTATTGC TATTATTCAG 
CCAAAACTTA ATCAGGCCTC AGTTGAAGTG CGTGAAGTGA TTAAGGATTT AGCCGAAATA 
GCCCAAGTAG AATTTGATGT CGTTGATGAT GAAGAGTCTG AAACTGCCTA TATCGAGTTG 
CTGGAGTTTG TGCGAATCGC CGCCATTATG TGTTATTCGG AATTCGGCCC AGAGATCCCG 
CACGGTGAGG ATGACGACAC CGCTGTTGTT CACTAA
 
Protein sequence
MVQVFISASI AAGKFLLESD MATPPSLRIE SLKIALDAAE IGQHPVEVHG ALVGLICGGV 
EQTGDMWIKP LFDLMNDGQP LPAQLHQLVC ELFQDSVARL VDFEFGFTPL LPEEEEPLSK 
RVEALSLWAQ SFLTGIAIIQ PKLNQASVEV REVIKDLAEI AQVEFDVVDD EESETAYIEL 
LEFVRIAAIM CYSEFGPEIP HGEDDDTAVV H