| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3187 |
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| Symbol | |
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| ID | 5080130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3713594 |
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| End bp | 3715054 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640500384 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001184698 |
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| Protein GI | 146294274 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGTCGT TCTCGGTTAT TTTGGGGATT GGCGACATAA GCGGTAAAAC TGAACAAAAA
CTCTCTTACG ATTTCATTCT CCATTTAGTA GGCATTTCTG TGGCAAAAGC ACCCAAAACA
TTGCAGCAGC GCATGAGTAT CGTGGCGCTG ACTTGGCCTA TTTTTATCGA GACCTTGCTG
CAATCCTTGC TTGGAATAAG TGACATTTTT ATGCTCAGCA ACTATTCCGA TAATGCGGTT
GCTGCGGTTG GGCTCACCAC TCAGTTGATG TTTTTTATGA TGGTGATGTC CATGATGGTG
AGCACGGGCG CGAGCATTTT GATTAGTCAA CACAATGGTG CGGGACAACC GCAGCAGGCG
ATTGATATTG GTGTTGCAAG CATTGCTTTG AGTCTCGGCT TAGCCGTGGT GATGGGCGCC
TCAATGTTTT TAGGTGCTAA GAGCATTATC GGTTTATTCG CCCTTGAGCA TGAGGTTGCA
GGCTTTGGAT ACGATTATTT AGTCATTTGC GGCAGCTTGA GCATAGGGCT AGTGATGAAC
ATTGCCTTCG CCGCTATTTT GCGTAGTTAT GGCTTTACCC GCTCGGCCAT GTTAGTCACC
TCGAGCACGG GCTTGATGAA TGTGTTAGGC AATTATATTG CCCTGTATTC TCCCTTTGGT
TTGCCTGTAT ACGGGGTAAC AGGGGTGGCG ATTTCTACTG TGACCAGCCA GGTTATCGGT
GCCTTTATTA TGCTGATGGT GATCCGGCAT AAGCAAATCC CGCTGCCGCT GCAACGACTT
AAGCTCTTAC CGCGCAGCAC TTATTGGCGC GTGATGCGCA TTGGCCTGCT TAATGCGGGT
GAGATGCTGT CTTACAATAT GGCGCAAATG ACGATTATCT ACTTTATCAG TCAGATGGGT
ACTTTATCGC TCACGGCCTA TACCTATGGC TTGAACATTA GCCGTTTTAT CTATTGTTTT
GCAGTCGCAC TCGGGCAGGC GACGCAAATC CAGACTGGAT ATTATGTGGG TAAACAATGG
TTCGATGAAA TCACCACTCG GGTGCAGCGT TACTGTTTGG TGGGTTTTAT TGCTTCATTG
ACCATAGTAT TGCTCTTCTA CTGGCAGCGA TTCGTTATTG TCGGCTGGTT GAGTGAAAAC
GAAGACGTTA TCCAACTAAC AGCGTTATTG CTCGCAGGTT CCATCGCCCT TGAAACCGGA
CGAGTGTTTA ATCTGGTGAT TATCTCGGCC TTAAAGGGCG CCGGTGATGT GGCATTCCCC
GTGCGGATTG GTCTCTTTAG TATGTGGGGC ATTGGCGTGT TATTGGCTTG GTTCTTTGGC
TTGCATTTAG GTTATGGCGT GTTGGCTGCA TGGCTTGCCG TTGCGGCAGA TGAGTGGGTG
CGTGGATTGA TTATGGTGCA GCGTTGGCGC TCGGGTCGCT GGCAGCGTTT TACGCGTATT
CCGCCAGTAA CCCCAGCTTA A
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| Protein sequence | MWSFSVILGI GDISGKTEQK LSYDFILHLV GISVAKAPKT LQQRMSIVAL TWPIFIETLL
QSLLGISDIF MLSNYSDNAV AAVGLTTQLM FFMMVMSMMV STGASILISQ HNGAGQPQQA
IDIGVASIAL SLGLAVVMGA SMFLGAKSII GLFALEHEVA GFGYDYLVIC GSLSIGLVMN
IAFAAILRSY GFTRSAMLVT SSTGLMNVLG NYIALYSPFG LPVYGVTGVA ISTVTSQVIG
AFIMLMVIRH KQIPLPLQRL KLLPRSTYWR VMRIGLLNAG EMLSYNMAQM TIIYFISQMG
TLSLTAYTYG LNISRFIYCF AVALGQATQI QTGYYVGKQW FDEITTRVQR YCLVGFIASL
TIVLLFYWQR FVIVGWLSEN EDVIQLTALL LAGSIALETG RVFNLVIISA LKGAGDVAFP
VRIGLFSMWG IGVLLAWFFG LHLGYGVLAA WLAVAADEWV RGLIMVQRWR SGRWQRFTRI
PPVTPA
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