Gene Sputcn32_3159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3159 
Symbol 
ID5078503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp3678457 
End bp3679116 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content46% 
IMG OID640500356 
Productprotein of unknown function DUF335, SprT 
Protein accessionYP_001184670 
Protein GI146294246 
COG category[S] Function unknown 
COG ID[COG3091] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.000000619203 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAAC CCGCTGACTT ACTCAATGCC TTACGCCGTC GCAGCAGTGA AGCCCTTGCA 
CCGCTAACAA AATCGACGTA TTCAGCCTTA GGCCAAAGCC AAGGTAAGTT TCAGGTTATA 
ATGAGTCCAC CAGCACAAGA TCCGGCAAAG GCGCATATTT TCACCGGTTC ATCACGCCCA 
CTCTCGACAC TACAAATTCA AGTACTAGAG CGAATTGAAA CCTGTTATCA AACGGCCGAA 
ATGACGCTTA AACGTGCATT CCCTCGCCCA ATAACGCAAT TTACGCTCAG GGGAAAAAGT 
GCAGGCACAG CCCATTTACA GCAGAACAGA TTAAGATTCA ATCCCGTATT ACTGCGGGAA 
AACAGCGAAG CTTTTCTGAC AGAGGTCGTG CCCCACGAAA TTTGTCATCT ACTGTGTTTT 
CAGCTTTTTG GTAAAACCAA ACCCCACGGT AAAGAATGGC AATCTTTGAT GTTAACGGTA 
TTTAAGGTCA ATCCAAAGAC TACCCACAAT TTCAACACCA CCTCAGTTGC AAGCAAAGAG 
GTTGAATATC GCTGTGCCTG CGGACCGATT CGACTCAGTA TTCGCCGCCA TAACAAGGTT 
CTACGCGGTG AAAGTCGTTA TATCTGTAAA CGCTGTAAGA CCCATTTAAC TGCTATCTAA
 
Protein sequence
MLKPADLLNA LRRRSSEALA PLTKSTYSAL GQSQGKFQVI MSPPAQDPAK AHIFTGSSRP 
LSTLQIQVLE RIETCYQTAE MTLKRAFPRP ITQFTLRGKS AGTAHLQQNR LRFNPVLLRE 
NSEAFLTEVV PHEICHLLCF QLFGKTKPHG KEWQSLMLTV FKVNPKTTHN FNTTSVASKE 
VEYRCACGPI RLSIRRHNKV LRGESRYICK RCKTHLTAI