Gene Sputcn32_3155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3155 
Symbol 
ID5078499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3670282 
End bp3674835 
Gene Length4554 bp 
Protein Length1517 aa 
Translation table11 
GC content46% 
IMG OID640500352 
Productcarbamoyl-phosphate synthase L chain, ATP-binding 
Protein accessionYP_001184666 
Protein GI146294242 
COG category[I] Lipid transport and metabolism 
COG ID[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.634219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGCA AAAATCAGCC CACACACATG ACTCAAGCCC AAACGCCCGA CCCGCTTTTT 
TTACAAGCCG AGCATTTGGC AAAGGATTTT TCTCTGTTTC CAAAACACAG CAAACAGAGT
TTAACGGAAG AAATTAAAGG TCTTTTAAGT GAAGATGCCA TTCAGGCAAA CTTAAAAGAT
TTAGCATCAT TAGATGTTGA TGGTTACGTT GCTAAGGTTA TCCTGCCGAC TCAAGATAAA
GGTCGCCCAG GGGCTAAGCG TATCATCGCC GATCTTAAAG GCCGATTGAT CACTGAAACT
CACTTAGGCT CTTTTTACAG TGCCGAAATT GAGCTTAATT TCGGTTCTCG TACTCGCCGT
GTTGGTTTTA TCGCTCAAGA GCGCACCACA GCGAACGGTG CTTGGATGCC TGAGCATCAC
TACGCTGCCT GTAAAGCAAT TCGTCATTTT GCCGAATTGT CTATGCCAAT TATCTATTTA
ATTGATACCC CAGGAGCGGA TGCTGGCGAA ATTGCTAACA GCCAAAACCA AGCTCATTCT
ATTTCTAAGG CGATTGCCGA GAGTGCTAAC GTTGACGTGC CTACAGTCGG TATCGTTATC
GGTGCGGGTT ATTCAGGTGG CGCGATTCCA TTAGCGGCGG CGAACATCCT GTTATCGCTG
CGCGATGGTA TTTTCAACAC GATTCAGCCA CAGGGTCTGC AAAGTATTGC CCGTAAGTAC
AATTTATCTT GGCAAGAATG CGCAAAATCT GTTGGTGTAT CGCCAGAAGA GCTTTATACC
TCCGGCTGTA TTGATGGCAT TATCGATTTT TCACCGAGCG ATCGTGATGA GCGTCAGCAT
AACTTGCGCC GCGCTATTAT CAGTAGTATC GAAACTGTTG AACGTGCCGC AATGAATTTT
GTGCGTGAAT CTAAGGATTT ACGTGAGCAT TATGACCGTA GTTTAATGCG TTTCCTTAAT
CCATCTAAAA ACCTGATGGC ATTAGAATTG AACGCAGAAT TGGCGGTAGC AACCAGCCCA
ACCAATCACC ATAACCTGTT CGGTAGTGCC TATCGCTATC TGCGTTATCT TACGTTACGC
AGTCGTATTC ATTCTATTTC TCAGGAACAA TATGGCCGCT TGTCGCGGGT CAGTGTGCCT
GAAGGCGACT TGTTAACGCG CATCCAGCAA GAGCAGGATC GGGTATTCCA AGCTTGGTTG
TCTAGCCCCG ATAAATTGGT TTATGACGAA GATTTAAACA AGCTTTGGGC TAACTTTGTT
GCTAAGCGTG ATGAAGTATC GACCGAACGT AATATGTTAA CCCGTTTAAT TTTGGGTGAA
CCAAAAGAAA ACTATAAAAA AGCCCGTAAG GCGCTGTTAT TTAACATCGG TTGGTCCTTA
TATCACCGTT GGAAGAGCAA TGCGGCCAAT AACTTTAAAG GGCTTATTCA GCATTTAGAA
AATCTACCTA AGTCAGTCAC TCAAGCTAAA TGGCCTGAGT TGAACCAGTT GACTGTGCTG
GATGTGGTGG TAAACGAAGA ACTGCGTGAA GATTTTATAT GGCAATGCCA TAACATCCTG
ATCTTTAACT CACTTTACGA CAACGTGGTG GGCAGCTTAG CGTCAATCGC TAAAGAAGCT
ATGATGTCTA AGAGTTTGTC ACGTAACTCA GTGAACAATC TGCTGCATAA GTCAATTGAT
CATGCACTGT CGACGCAGGA CACCGCTAAC GATAAAGCCA AATTTTACAA GTGGCTTAAG
TACTTTATGG GGCAATCTAA CCGTGCCGAC TTGTTGGTAC GTGTAGAGCA GTGGAAGAGT
GTGGGTTTCC CACAGCTCAA TGACAGTTTG TTCGTGGTGC TGACTTACTT CTTCGAGCGC
CTACTACCAG AATATTTTGA TAGCGAAAGT GACACTAGCA AATACACTGG TGCAATAAAC
CCTGTGCGTA TCGGTCGCCG TAAAGACTTC TGGAACCGCT TGACCATGGG TTATCAGGAT
CTATTGATCC AAAAAGTACT GCGGGACGAA AAGCGTAAAG GCAATATGAC ATGGGAAAAT
GTCATCAAGC AATTCTTTAC CCGTTTTGAT GAGATTAACG GCGACAAAAT GTCGGCTAAC
TTATTGAACT TCCCAGGTTT CCGTTTATCG ATTGAAGATG CTTTAGATAA AGGAATACGT
CCTTGTGGTC TAATCACTGG TATTGCGGAT TTTAAAGAGA AAGGCCAAAA AGTCCGTGTG
GGCGTGGCTG TCTCTAACAC CGCATTCCAA GCGGGTGCCT TCGATATGGC GAGCGCCGAG
AAATTCTCTG CGCTGCTGAT TGAGTGTGCT AAGCGTAAGT TACCTGTTGT GTGCTTTATT
AGCTCTGGCG GTATGCAGAC GAAAGAAGGC GCGGCAGCAC TTTTCTCTAT GGCTGTGGTG
AACGATCGTA TCACGCGCTT TATTCGTGAT AACGAATTGC CAGTACTGAT GTTTGGTTTT
GGTGACTGTA CCGGTGGTGC GCAGGCGAGT TTTGTGACTC ACCCATTGGT GCAAACTTAC
TATCTGTCTG GTACTAACAT GCCATTCGCA GGTCAAATGG TGGTGCCAGC TTACTTACCA
TCAACGGCAA CGCTGTCTAA CTACTTGTCA AAAGTACCTG GCGCAATGGC GGGCTTAGTC
CATAACCCAT TCAGCGACAA TTTAGACTCT CAGTTAGCAG GTATCGATCC TCTGATGCCA
ATGCCTTCGG CAAAAATTAA CGATGTGATC ATCAATGCAC TGTCGACCTT AGTGGTTGAA
GCTACTGTTG AAGAAGAAGT GATCGTGCAG AACGATCCAC GTAAGTTAAT GAAGCCTATT
AACAAAGTAT TGGTTCACGC CCGTGGTTGT ACAGCTGTAA AACTTATTCG TAAGGCGCAT
GACAATAATA TCAATGTGGT ATTAGTGGCG TCGGATCCTG ATATGACGTC AGTGCCAGCG
GACATGCTCA AAGAGACCGA TAAGTTAGTT TGTCTCGGTG GTAACACATC GGATGAAAGT
TACTTGAACG CATACTCTGT GCTGAAAGTG GCCGAATATG AACAGGTTGA TGCATTGCAT
CCTGGTATTG GTTTCCTATC AGAAAGCCCG CAGTTTGCTG CATTGTGTGT GAATAACGGT
GTTAACTTCG TCGGTCCTAG CGTGCATTCA ATGACCACTA TGGGTAATAA GTCGAACGCG
ATTAAAACGT CTCAAGCGCA AAATGTACCA GTCGTGCCAG GTTCTCACGG TATTCTGACC
AATGCTGAGC AAGCGGTTAA CGTGGCGAGT GAAATTGGTT ATCCAGTGCT GCTGAAAGCC
GTACAAGGCG GTGGCGGTAA AGGTATTCAG GTTGTTAAAC GCCCTGAGGA TATGATTGGC
CTATTCCAAA AGACAGCGAC CGAAGCGGCT GCAGCTTTTG GTAATGGCGA CTTATACTTA
GAAAAATATG TAACCTCACT GCGTCATATC GAAGTGCAGT TATTGCGTGA CAAGTTCGGC
AACGCCAAAG TGTTAGGTCT GCGTGATTGT TCGGTACAAC GTAACAACCA AAAAGTCGTC
GAAGAATCTG GCTCAACCAT GTTGCCGGAT GAGCTTAAAA AACAGGTGTT GGATTACACC
CGTGCTTTAG GTGATGCGAC TGATTATATG GGTGCTGGTA CTGTTGAGTT CATCTATAAC
TTAGATGCAA ACGAAGTGTA CTTCATGGAA ATGAACACCC GTCTACAGGT AGAGCATCCA
GTAACGGAAG CCACTTCTGG TATCGATATT GTGAGTGCAC AGTTTGATAT CGCTGCGGGC
CGTTCAATCG AGCATCTAGA GCCGAAGGAA ATTGGCTATG CGATGGAAGT ACGTGTGACT
GCTGAAAAAG CGGCGCTCGA TAGCCATGGC ATACTGCAGC TTATTCCAAA TCCTGGCAAG
ATCACTGAGT GTGTATTCCC AGAGCATCCT GATGTGGAAA TCATCTCAAT TGCTGCACCA
GGCAAAGAAG TCTCGCCATA CTATGATAGC TTGATTGCGC AAATCATTAT GCGCGGTGAA
AACCGTGAAG ATGTGATTGC CAAGCTGCAT GCTTATCTGG ATAGCGTAGT GCTGAAAGGT
ATCGCAACTA ACATTCCGTT ACTTAAGCTA ATCTTAAATG ACGGTACCTT CAAAGAAGGC
GTATACGACA CTAACTATCT ACCACGCTTT ATGGCTGAAC TTGATATTCC TGCGCTTATC
GCAGAAATGG AAGCGGCAGC TGAAACAGTG GGTGTTGATA CAGAGTCTTT ACGTGTGGGC
GAAAGTAACG AATTGAAAGT ATTAGCCCAA GGCGCGGGTA TCTTCTATAC CTCTCCTGCA
CCGGGTGAGC CTGATTTCGT GAAAGAAGGT GATATTGTTA CCGTTGAGCA AACCTTAGCG
TTAACTGAAG CGATGAAGAT GTTCTCGCAG GTCAACTTGG CTGGCTTTAA CCGTCAAGGC
GCCATACTCT ATCCTGAGGA TCAGAAGTAT CGCATCGAGC GCATTCTGAA CAGCAATGGT
CAACAAGTGT CTCAAGGTGA TTTACTCTTT GTGGTATCGC CCGTCGACGC TTAA
 
Protein sequence
MTSKNQPTHM TQAQTPDPLF LQAEHLAKDF SLFPKHSKQS LTEEIKGLLS EDAIQANLKD 
LASLDVDGYV AKVILPTQDK GRPGAKRIIA DLKGRLITET HLGSFYSAEI ELNFGSRTRR
VGFIAQERTT ANGAWMPEHH YAACKAIRHF AELSMPIIYL IDTPGADAGE IANSQNQAHS
ISKAIAESAN VDVPTVGIVI GAGYSGGAIP LAAANILLSL RDGIFNTIQP QGLQSIARKY
NLSWQECAKS VGVSPEELYT SGCIDGIIDF SPSDRDERQH NLRRAIISSI ETVERAAMNF
VRESKDLREH YDRSLMRFLN PSKNLMALEL NAELAVATSP TNHHNLFGSA YRYLRYLTLR
SRIHSISQEQ YGRLSRVSVP EGDLLTRIQQ EQDRVFQAWL SSPDKLVYDE DLNKLWANFV
AKRDEVSTER NMLTRLILGE PKENYKKARK ALLFNIGWSL YHRWKSNAAN NFKGLIQHLE
NLPKSVTQAK WPELNQLTVL DVVVNEELRE DFIWQCHNIL IFNSLYDNVV GSLASIAKEA
MMSKSLSRNS VNNLLHKSID HALSTQDTAN DKAKFYKWLK YFMGQSNRAD LLVRVEQWKS
VGFPQLNDSL FVVLTYFFER LLPEYFDSES DTSKYTGAIN PVRIGRRKDF WNRLTMGYQD
LLIQKVLRDE KRKGNMTWEN VIKQFFTRFD EINGDKMSAN LLNFPGFRLS IEDALDKGIR
PCGLITGIAD FKEKGQKVRV GVAVSNTAFQ AGAFDMASAE KFSALLIECA KRKLPVVCFI
SSGGMQTKEG AAALFSMAVV NDRITRFIRD NELPVLMFGF GDCTGGAQAS FVTHPLVQTY
YLSGTNMPFA GQMVVPAYLP STATLSNYLS KVPGAMAGLV HNPFSDNLDS QLAGIDPLMP
MPSAKINDVI INALSTLVVE ATVEEEVIVQ NDPRKLMKPI NKVLVHARGC TAVKLIRKAH
DNNINVVLVA SDPDMTSVPA DMLKETDKLV CLGGNTSDES YLNAYSVLKV AEYEQVDALH
PGIGFLSESP QFAALCVNNG VNFVGPSVHS MTTMGNKSNA IKTSQAQNVP VVPGSHGILT
NAEQAVNVAS EIGYPVLLKA VQGGGGKGIQ VVKRPEDMIG LFQKTATEAA AAFGNGDLYL
EKYVTSLRHI EVQLLRDKFG NAKVLGLRDC SVQRNNQKVV EESGSTMLPD ELKKQVLDYT
RALGDATDYM GAGTVEFIYN LDANEVYFME MNTRLQVEHP VTEATSGIDI VSAQFDIAAG
RSIEHLEPKE IGYAMEVRVT AEKAALDSHG ILQLIPNPGK ITECVFPEHP DVEIISIAAP
GKEVSPYYDS LIAQIIMRGE NREDVIAKLH AYLDSVVLKG IATNIPLLKL ILNDGTFKEG
VYDTNYLPRF MAELDIPALI AEMEAAAETV GVDTESLRVG ESNELKVLAQ GAGIFYTSPA
PGEPDFVKEG DIVTVEQTLA LTEAMKMFSQ VNLAGFNRQG AILYPEDQKY RIERILNSNG
QQVSQGDLLF VVSPVDA