Gene Sputcn32_3154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3154 
Symbol 
ID5078498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3667622 
End bp3669715 
Gene Length2094 bp 
Protein Length697 aa 
Translation table11 
GC content46% 
IMG OID640500351 
Productelongation factor G 
Protein accessionYP_001184665 
Protein GI146294241 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00484] translation elongation factor EF-G
[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.1485e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAT TATCCAAATA CAGAAACATT GGTATCTTCG CTCACGTTGA CGCGGGTAAA 
ACCACGACCA CCGAGCGTAT TCTTAAGCTA ACTGGTAGAA TTCACAAAGC TGGTGAAACA
CACGATGGTG AATCTACAAC AGACTTCATG GTTCAGGAAG CTGAGCGCGG TATTACCATT
CAATCAGCAG CAGTAAGCTG TTTCTGGAAA GAACACCGTT TCAACGTTAT TGATACCCCA
GGGCACGTTG ACTTCACCGT TGAAGTTTAC CGTTCTCTGA AAGTACTCGA CGGCGGTATA
GGTGTATTCT GTGGTAGCGG CGGTGTTGAG CCTCAATCAG AAACTAACTG GCGCTATGCT
AACGAATCTG AAGTTGCTCG TATCATCTTC GTAAACAAGT TAGACCGTAT GGGTGCTGAC
TTCCTGCGTG TTGTTAAGCA GACTAGAGAT GTTTTAGCGG CTAACCCACT GGTTATGGTT
CTGCCTATCG GTATCGAAGA CGAGTTTAAA GGTGTTGTTG ACCTATTAAC CCGTAAAGCC
TACATATGGG ATGATTCAGG TTTACCAGAA AACTTCAGTG TGACAGACGT TCCAGCTGAC
ATGGTTGATC AAGTTGAAGA ATACCGTGAA ATGCTGATCG AATCTGCTGT TGAGCAAGAT
GACGATCTGA TGGAAGCCTA CATGGAAGGC GAAGAGCCAT CGATTGAAGA CCTGAAACGT
TGTATCCGTA AGGGTACTCG TACAATGGCT TTATTCCCAA CATACTGTGG TTCTGCGTTC
AAGAACAAGG GTATGCAACT GGTTCTAGAC GCTGTTGTTG ATTACTTACC AGCGCCAAAC
GAAGTTGATC CACAACCTTT AACAGACGAA GAAGGTAACG AAACTGGCGA ACACGCTATC
GTTTCTGCCG ATGAGCCATT GAAAGCGTTA GCGTTCAAAA TTATGGACGA CCGTTTCGGT
GCTCTGACCT TCGTACGTGT TTATTCTGGC CGTTTGAAGA AAGGCGATAC CATTCTTAAC
AGTGCGACTG GTAAGACTGA ACGTATCGGC CGTATGTGCG AAATGCACGC AAACGACCGT
ATCGAAATTG AATCGGCTGA AGCTGGTGAC ATTATCGCTA TCGTGGGCAT GAAGAACGTG
CAAACGGGTC ACACTCTGTG TGATGTTAAG CACCCATGTA CATTAGAAGC CATGGTGTTC
CCTGAGCCTG TAATCTCTAT CGCAGTAGCG CCAAAAGATA AAGGTGGTAG CGAGAAGATG
GCTATCGCTA TCGGTAAGAT GATCGCTGAA GATCCATCTT TCCGCGTAGA AACAGACGAA
GATTCAGGTG AAACCATCCT TAAAGGTATG GGTGAACTGC ACTTAGATAT CAAAGTTGAC
ATCTTGAAGC GTACTTACGG CGTTGAGTTG ATCGTAGGTG AGCCACAAGT GGCCTACCGC
GAAACCATTA CTCAAATGGT TGAAGACCAA TACACCCACA AGAAACAATC TGGTGGTTCT
GGTCAATTCG GTAAGATTGA ATACATCATC CGTCCTGGTG AGCCAAATTC TGGTTTCGTA
TTCAAATCTT CAGTTGTGGG TGGTAGTGTT CCTAAGGAAT TCTGGCCTGC AGTTGAGAAA
GGTTTTGCGA GCATGATGAA CACGGGTACT ATCGCTGGCT TCCCAGTGTT AGACGTAGAG
TTCGAATTAA CTGACGGTGC TTACCACGCA GTTGACTCAT CAGCTATCGC GTTCGAAATC
GCTGCTAAAG CGGCATTCCG TCAGTCTATC GCTAAAGCTA AGCCACAACT TCTTGAGCCA
ATCATGAAAG TTGACGTGTT CAGCCCAGAA GACAACGTGG GTGATGTGAT CGGTGACTTA
AACCGTCGTC GCGGTATGAT CAAAGACCAA ATCGCAGGTG TGACTGGTGT TCGTATTAAG
GCTGACGTAC CGTTATCAGA AATGTTCGGT TATATCGGTA CTCTACGTAC AATGACTTCT
GGTCGTGGTC AGTTCTCTAT GGAGTTCTCA CACTACACAC CATGTCCAAA CAGCGTAGCT
GAAAAAGTAG TTGAGCAAGT TAAAGAGCGT AAAGCTGCTG AAGCTAAGAA GTAA
 
Protein sequence
MTELSKYRNI GIFAHVDAGK TTTTERILKL TGRIHKAGET HDGESTTDFM VQEAERGITI 
QSAAVSCFWK EHRFNVIDTP GHVDFTVEVY RSLKVLDGGI GVFCGSGGVE PQSETNWRYA
NESEVARIIF VNKLDRMGAD FLRVVKQTRD VLAANPLVMV LPIGIEDEFK GVVDLLTRKA
YIWDDSGLPE NFSVTDVPAD MVDQVEEYRE MLIESAVEQD DDLMEAYMEG EEPSIEDLKR
CIRKGTRTMA LFPTYCGSAF KNKGMQLVLD AVVDYLPAPN EVDPQPLTDE EGNETGEHAI
VSADEPLKAL AFKIMDDRFG ALTFVRVYSG RLKKGDTILN SATGKTERIG RMCEMHANDR
IEIESAEAGD IIAIVGMKNV QTGHTLCDVK HPCTLEAMVF PEPVISIAVA PKDKGGSEKM
AIAIGKMIAE DPSFRVETDE DSGETILKGM GELHLDIKVD ILKRTYGVEL IVGEPQVAYR
ETITQMVEDQ YTHKKQSGGS GQFGKIEYII RPGEPNSGFV FKSSVVGGSV PKEFWPAVEK
GFASMMNTGT IAGFPVLDVE FELTDGAYHA VDSSAIAFEI AAKAAFRQSI AKAKPQLLEP
IMKVDVFSPE DNVGDVIGDL NRRRGMIKDQ IAGVTGVRIK ADVPLSEMFG YIGTLRTMTS
GRGQFSMEFS HYTPCPNSVA EKVVEQVKER KAAEAKK