Gene Sputcn32_3122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3122 
Symbol 
ID5078466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3629169 
End bp3630197 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content46% 
IMG OID640500319 
Productalpha/beta hydrolase fold 
Protein accessionYP_001184633 
Protein GI146294209 
COG category[R] General function prediction only 
COG ID[COG0429] Predicted hydrolase of the alpha/beta-hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.966432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAATT CTTTTATGCC ACCTTGGTGG GCCAAGAGTC CACATATACA AACGATTTTG 
CCCGTATTGA CGAAAGTCGC CAAACCGGCA CTGACAAGGC AGCGCCTCGA ATTGCCCGAT
GGTGACTTTA TCGATTTAGA TTGGCAGGAT GTCCCGCAGC AGGGTAAACC AATAGTCGTG
ATCATCCATG GATTAGAGGG CAGCGCGGCA TCCCATTATG CGAGGCGCAT ACTGCTGAGC
TGTAAAGAAC AGCAACTTTC AGCCGTTGTG CATCATCACA GAAGTTGCTC GGGCGAAGCC
AATCGTCTCG CTCGCAGTTA CCACAGTGGT GACACAGACG ATCTGCAGTT TAGCCTATCA
ACACTACAAC AAACGTATCC GCAATCCCCG TTATTAGCTG TAGGTTACAG TTTAGGTGGA
AATGTACTCA CTAAGTACCA AGGCGAATAT CAAGATAGCA GCTTATTAAC TCGGGCCGTG
GTTGTCTCAG CCCCCTTGCA ATTATCAGCT TGTGCAAAAC GACTCGAACA TGGCTTCTCT
AAGGTTTATC AAAGCTACCT TATCAAGCAA TTACAAAAAA AAATAAACCA AAAACTCGCT
GATCCTGATT TGGCAAACAC TCTGCCATTA AGCCGATGGC AAGTCGAGCA GCTTAATACT
TTTTATGACT TCGACGATAA AGTCACGGCA CCACTCCACG GTTTTAATGG CGTTGATGAT
TATTATATTC GCGCTAGCGG CCTGCCCTTT GTTAACCGCA TTACTAAACC CACACTGATC
ATACATGCCA AGGATGATCC CTTTATGACG GACGATGTGA TCCCACATCC AAGCCAAATA
TCTGAGCATG TCGAATACGA ATTACATTCC TATGGAGGCC ATGTTGGTTT TATCGAAGGC
GGTACACCAT GGAAACCACG CTTCTATCTG GAACGTCGCA TTTTAGCTTT CTTACGTGGC
AACACCCTAT TCGACAAACG CTTGTCTGAT AACATTGAAC AAGGAAAAAA CCATGCTCAT
CCCCTATGA
 
Protein sequence
MPNSFMPPWW AKSPHIQTIL PVLTKVAKPA LTRQRLELPD GDFIDLDWQD VPQQGKPIVV 
IIHGLEGSAA SHYARRILLS CKEQQLSAVV HHHRSCSGEA NRLARSYHSG DTDDLQFSLS
TLQQTYPQSP LLAVGYSLGG NVLTKYQGEY QDSSLLTRAV VVSAPLQLSA CAKRLEHGFS
KVYQSYLIKQ LQKKINQKLA DPDLANTLPL SRWQVEQLNT FYDFDDKVTA PLHGFNGVDD
YYIRASGLPF VNRITKPTLI IHAKDDPFMT DDVIPHPSQI SEHVEYELHS YGGHVGFIEG
GTPWKPRFYL ERRILAFLRG NTLFDKRLSD NIEQGKNHAH PL