Gene Sputcn32_3087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3087 
Symbol 
ID5079727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3588904 
End bp3589887 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content47% 
IMG OID640500285 
Producthypothetical protein 
Protein accessionYP_001184599 
Protein GI146294175 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.62391e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGAA TGCTAAGGCA TGTTCTCATA TCGATACTCT TGATTACGGT GACTTTATCC 
TTGACGGGAT GTGGTGATGA TAGACCGGAT AAAATAGCTA AGTATCAACA ACTCACTGAG
CAGCGTCTCG CGTCGCTCGG CACTATGCTC GATGACGGGC AATTGCGTAA CGCCAATCTG
CTAAAACAAT ACAGCACACT GTTAAAACAG CAAAAACCCG ATTTAGCACC ACTGCTTGAT
GAACTAGCGA AGGATTCAGG CCCCAAAGGG CCTATGTATA CATCACTAAA ACGTCGCTTA
GAAGAGTCTA AAAATGCGGC AAATTTTGCC GATCTCGATC AGCAATTAGC CGAAGCTGAA
AACCTCTATC AAGCGGCAGA TCCGAGCCTG TTTAACGATA TGCTGTCCGA TCCCGTTAAC
GTGGTTGCCG ATATGTCCGA GGGTAAGCTC GCCCGCGTAA ATGCGATTAG CCGTGAAGCC
GCAGCATTAG CCAATGGCGC AGAAGACTTT GGCCCTGGTA GCCAACTTGT TGGTAACCCT
GCCTACGGCA GTTGGCAAAC CGATTCCAGT GGTACGTCAT TTTGGGCTTG GTACGGCATG
TATTCCATGT TCTCAAATAT TTTTAATCGT CCCATTGCCT ATGACCGCTG GTCAGGTAAT
CGTGGCTATA GTTATTACAA TGACGTAGGC CGTTATCGCT ATACCTCACC AAAGCAAGCC
GATGCCCAAG CGAAAACATT TGAACAAACT AAAAAACGAT TTGACTCTCA AGGTAAGCGT
TTTGATAGTC CCTATGCGAA ACCACGTACA GGAGCCACGG CATTATCCCG TGAAAGCACG
AGTACACCCA AAGCCAATAC AACGAGCGCG AGTAAAAGTT CTGCGAATAA TTCAAGCAGT
AAGTTCCGTT CAAACTATTC TAAAGACAGT AGTTTCCGTA ATTCCAGCAA TCGTACGACC
CGCAGTGTGC GCCGGGGCAA GTAA
 
Protein sequence
MAGMLRHVLI SILLITVTLS LTGCGDDRPD KIAKYQQLTE QRLASLGTML DDGQLRNANL 
LKQYSTLLKQ QKPDLAPLLD ELAKDSGPKG PMYTSLKRRL EESKNAANFA DLDQQLAEAE
NLYQAADPSL FNDMLSDPVN VVADMSEGKL ARVNAISREA AALANGAEDF GPGSQLVGNP
AYGSWQTDSS GTSFWAWYGM YSMFSNIFNR PIAYDRWSGN RGYSYYNDVG RYRYTSPKQA
DAQAKTFEQT KKRFDSQGKR FDSPYAKPRT GATALSREST STPKANTTSA SKSSANNSSS
KFRSNYSKDS SFRNSSNRTT RSVRRGK