Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3079 |
Symbol | |
ID | 5079719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3576773 |
End bp | 3577543 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640500277 |
Product | hypothetical protein |
Protein accession | YP_001184591 |
Protein GI | 146294167 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02001] conserved hypothetical protein, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACCGA TTAAGTCGGC TCTTTGTTCG CGTTGCTCGC GCCTTTGCGC GGGTGTGATG ATGGCGCTAT CTTCACTCTC TATGGGCGCG CTTGCCAGCA CTGAGGCTCA AGGGGGCAAT GCCTCTTGGC AGAGCCAAGG GAGTGTGATG CTCATCAGTG ATTATGCGTT TCGCGGTATT TCTCAAACCG ATGAAGGACC AGCAGTTCAA GCAGGGTATA CCTTAAGCCA TGATTCTGGC TGGTATGGCT CGCTTTGGGG CAGTAACATC GAATTTGGGG ATGGAAGTTT AGAACTCGAC TTATCCGCTG GCTGGGCCAA GGATTGGGAT AATGGCTTAA CAACGGACCT AGGCGTGATA CGTTATCAAT ACTCGCAGGA CTATACCGAC CTGAGTTATA ACGAAATTTA TGCTGTGGTA AGCTACGCCG ATGCTAAGTT AGGGTTGGTT TATTCTCCTG ATTATTTCGG CGAGAATGTG GACGATTTTC AGTATGTCTA CGTAAGCTAT GAGCCGCAAC TGTTCTCTAA TGTAAGCCTC GCTCTGCATC TTGGGAGTAA TTTTTTTGCG TCCCAGCAAG ATATGGCGCA GTTCTTAGGC TCTATGGTCG CAGACAATAA CCACTATTGG GATTGGCGAG TGGGGCTGAA CCTCAATATG ACTGAGCAGG ATGTGTTGAG TGTCGGTTAT GTCGATACGG ATTTATCGCA GAGTCAGTGC CAGTCCCTGT GTGATGCGCG CTGGCTAGTG AGTCTTTCAA GGAGTTTCTA A
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Protein sequence | MLPIKSALCS RCSRLCAGVM MALSSLSMGA LASTEAQGGN ASWQSQGSVM LISDYAFRGI SQTDEGPAVQ AGYTLSHDSG WYGSLWGSNI EFGDGSLELD LSAGWAKDWD NGLTTDLGVI RYQYSQDYTD LSYNEIYAVV SYADAKLGLV YSPDYFGENV DDFQYVYVSY EPQLFSNVSL ALHLGSNFFA SQQDMAQFLG SMVADNNHYW DWRVGLNLNM TEQDVLSVGY VDTDLSQSQC QSLCDARWLV SLSRSF
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