Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3047 |
Symbol | pbpG |
ID | 5079789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3530182 |
End bp | 3531150 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640500245 |
Product | D-alanyl-D-alanine endopeptidase |
Protein accession | YP_001184559 |
Protein GI | 146294135 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATCA GATCTTTACT CAGTAGTTTT ATCTTTGTCT GCAGCAGTTG TACTGTTGCC GCGACAGCAT ATTGTGCCGA ATCGGCCTCT GTCACTACGA AAAGTACCGC TTCTAAATCA TCTGCCTCAG CAAAGCCTGT TTTAAATAAA CAAGAAGTCG CGGCGAACAG TGCTTTGGTG GTTGATCTCA AAACCAATGA GGTCCTTTAT TCGAGTAATC CTAATGCTGT TATGCCAATA GCCTCTGTGA CTAAATTAAT GACGGCTATG GTGACGTTAG ATGCCAAATT GCCAATGGAT CAGAAGCTCG CTGTTAATAT TAGCGATACT AAAGAAATGC GTGGTGTTTA CTCTCGGGTA CGCATCGGTA GCGAAATTAC CCGTAAAGAG ATGTTATTGT TGACCTTGAT GTCTTCAGAA AATCGCGCCG CTGCAAGCCT TGCTCATCAT TATCCCGGTG GACATAAGGC CTTTATTAAG GCGATGAATG CCAAAGCGAA AGCATTAGGT ATGAAAAATA CTCGTTATGT TGAACCGACG GGCTTATCTC ATAAAAATGT GTCTAGTGCG AGCGATCTTA TCGTTCTGCT TAAAGCGAGT GAGAAATACC CTATGCTTGG TGAGTTGAGT GCCACAGAGA AGAAAACGGT GACGTTTGGC AAACCTAAGT ACAGTTTAGA TTTTCGTAAT ACAAATCGCT TGGTTTACAA AGATAACTGG AATATTCATC TTACAAAAAC GGGCTTTACC AATGCCGCAG GCCATTGCTT AGTGATGCGT ACTGAAATGG CAAAACGTCA AGTGGCTTTT GTTGTGCTTG ATGCCTATGG CAAATATACC CATCTAGCCG ATGCAAACCG TTTACGTAAT TGGTTAGAAA CGGGTAAGGT GACACCGATA CCTACAGAAG CTAAGCAGTA TAAAAAACAG CGAAGTACTC AGCAGATAGC CAAGGTCAGT GGGACCTAG
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Protein sequence | MKIRSLLSSF IFVCSSCTVA ATAYCAESAS VTTKSTASKS SASAKPVLNK QEVAANSALV VDLKTNEVLY SSNPNAVMPI ASVTKLMTAM VTLDAKLPMD QKLAVNISDT KEMRGVYSRV RIGSEITRKE MLLLTLMSSE NRAAASLAHH YPGGHKAFIK AMNAKAKALG MKNTRYVEPT GLSHKNVSSA SDLIVLLKAS EKYPMLGELS ATEKKTVTFG KPKYSLDFRN TNRLVYKDNW NIHLTKTGFT NAAGHCLVMR TEMAKRQVAF VVLDAYGKYT HLADANRLRN WLETGKVTPI PTEAKQYKKQ RSTQQIAKVS GT
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