Gene Sputcn32_3038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3038 
Symbol 
ID5079780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3519371 
End bp3519892 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content39% 
IMG OID640500236 
Productprotoporphyrinogen oxidase 
Protein accessionYP_001184550 
Protein GI146294126 
COG category[H] Coenzyme transport and metabolism
[C] Energy production and conversion 
COG ID[COG4635] Flavodoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAAA TTCTGATCAT TTTCTCTAGT GTTCACGGTC AAACCCGTAA GATCACTAAT 
CAGCTAGCGC AGCAACTTAA GGACTTAGGT AATTCGGTTG TTATCGCCGA TATTAAGGCT
GTACCCGCAA TGGAGTCGTT CGACAAAATC ATTATTGGCG CCAGTATTCG CCATGGAAAA
CATAATCCGA CGTTATATGA ATTTATTCAA AAGCATCAAA AACTACTAAC ACAAAAAGTA
AGTGGTTTTT TCTCGGTTAG CTTAGTGGCG CGTAAGCCGG AAAAAAATAC GCCTGAGACT
AATCCTTATA TGCAGGCTTT TTTAAGCAAA ACGACTTGGA GACCTCAGTT ATTGCAAGTG
TTTGGTGGTA GCTTGAACTA TCAAGGCTAT AACGCTTTAG ATAGGAATAT TATTCGTTTT
ATTATGTGGT TAACTAAGGG GCCGACGGAT CCAGTTACCA ATGTTGAATA TACAGATTGG
CAGAAAGTAA ACGAGTTTGG TGAGCAAATC CATCAAGCAT AA
 
Protein sequence
MKKILIIFSS VHGQTRKITN QLAQQLKDLG NSVVIADIKA VPAMESFDKI IIGASIRHGK 
HNPTLYEFIQ KHQKLLTQKV SGFFSVSLVA RKPEKNTPET NPYMQAFLSK TTWRPQLLQV
FGGSLNYQGY NALDRNIIRF IMWLTKGPTD PVTNVEYTDW QKVNEFGEQI HQA