| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3026 |
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| Symbol | |
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| ID | 5079768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3510076 |
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| End bp | 3510966 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640500224 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001184538 |
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| Protein GI | 146294114 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTAA AGGTTATCCG CTATTTTATT GAAATCGTCG ATGCGGGTGG TTTCGGTAAA
GCCTGCGAAA AAGTGCACCT AACTCAGCCA GCGCTTTCTA AAGCCGTGCG TCAGTTAGAG
GAAGAACTCG ATCTCACCTT GCTTGAACGT GGCAAACGTG GCACCCAAGT TAAACTCACC
CCTGCAGGAG AAGTTGTCTA TCGCCACGGA AAAGACTTAC TCGATGGCCG CAAACGCATG
TTAGCGGAGC TTGCAGCACA ACGTAATTTA AGCGCAGGAG AACTCAACCT CGGTTTAGCG
CCTCTAGGCA GCGCCGAAAT CTTTGCGCCT ATCATTGCCA AATACCGCCA GCAATACCCA
CAAATTGAAA TGCATTTGCT CGTGCGTGGT GGTGTAGAAC AAACTTCGGC GATTCAAAAA
GGGGAAATAG AACTGGCTAC CGGTATTATT GATTTCGATG ATGGCTATGA TGGTATCCGC
GTATTTAACG ATCCAATGGT GGTCGTGCTC CCCAAGGAAA ATCCATTAGC CTCCAGAGAA
CATCTATTCA TTACCGACTT AAACCATCAG CCCCAAGTGA TGTTTGAAAC TGAATATACA
CTTTATCAAT TAGTTCTAAC GGCTTGCCAA GCGGCAGGAT TTACCCCTCA AAATATCACT
CGAGTCAGCC AAGCTGATTT CGGCATTGCT TTAGTCGCGG CAGGAACGGG CATTATGGTG
CTGCCACGCT CAATTGCGCG ACGCTACAGT GTCTCAGGGG TAGTCAATAT TCCCCTAGCG
AGTGACGAAT TACGCTGGGA ACTATCACTC TTCTGGCGTA AGGAGCAAGT TCTATCCTTT
GCAGCCCAAG CCATGATCAA TTTGGTTAAG AAACATTTGG CGAAAGCCTA A
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| Protein sequence | MDLKVIRYFI EIVDAGGFGK ACEKVHLTQP ALSKAVRQLE EELDLTLLER GKRGTQVKLT
PAGEVVYRHG KDLLDGRKRM LAELAAQRNL SAGELNLGLA PLGSAEIFAP IIAKYRQQYP
QIEMHLLVRG GVEQTSAIQK GEIELATGII DFDDGYDGIR VFNDPMVVVL PKENPLASRE
HLFITDLNHQ PQVMFETEYT LYQLVLTACQ AAGFTPQNIT RVSQADFGIA LVAAGTGIMV
LPRSIARRYS VSGVVNIPLA SDELRWELSL FWRKEQVLSF AAQAMINLVK KHLAKA
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